CX299795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299795 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.967e-20 Identity = 61/155 (39.35%), Postives = 80/155 (51.61%), Query Frame = 1 Query: 1 TAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAXKWVASHVDGNGPEDWLNRYADFE-RVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-DVKIRA---GTERFWRFTCPSTSGLDDPWVNP 450 +A S Y + LV+ ++ VSVDYRR+PEH P AY+D W+A WV S V WL D V+ +GDS+G NIAH++A+R E G V+G +L+HP F G E SE T D K + +WR P D P NP Sbjct: 121 SANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE---GVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNP 265
BLAST of CX299795 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.070e-17 Identity = 58/155 (37.42%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 1 TAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAXKWVASHVDGNGPEDWLNRYADFE-RVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSE-PTDVK---IRAGTERFWRFTCPSTSGLDDPWVNP 450 +A S Y + V + + VSV+YRRAPEH P AY+D W A KWV S + ++ D + RVF SGDS+G NIAHH+A+R E G V G +L++ F G E SE D K + +W+ P + D P NP Sbjct: 128 SASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE---GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNP 272
BLAST of CX299795 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.010e-17 Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 1 TAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAXKWVASHVDGNGPEDWLNRYADFE-RVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-----DVKIRAGTERFWRFTCPSTSGLDDPWVNP 450 +A S Y LV + VSV+YRRAPE+P P AY+D W A WV S WL D + +F +GDS+G NIAH++A+R G G +V+G +L++P F G E SE + V +R + +W+ P + P NP Sbjct: 121 SANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVR-DRDWYWKAFLPEGEDREHPACNP 265
BLAST of CX299795 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.790e-16 Identity = 61/174 (35.06%), Postives = 83/174 (47.70%), Query Frame = 1 Query: 1 TAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAXKWVASHVDGNGPEDWLNRYADFE-RVFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSEPT-----DVKIRAGTERFWRFTCPSTSGLDDPWVNPCAD-SSSLASLGCARVLV 501 +A S Y LV + VSV+YRRAPE+ P AY+D W KWV S WL D + R+F +GDS+G NI H++A+R ID V+G +L++P F G E SE V +R + +WR P + P +P S SL L + LV Sbjct: 119 SANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID---VLGNILLNPMFGGTERTESEKRLDGKYFVTVR-DRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLV 281 The following BLAST results are available for this feature:
BLAST of CX299795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299795 ID=CX299795; Name=CX299795; organism=Citrus clementina; type=EST; length=507bpback to top |