CX299803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 1.731e-36 Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 D L R EAV W+L+VNAHYGFSTL A+LAI YLD+F+ S+ Q DKPWM+QL++V CLSLAAKVEETQVPLLLD QVE KYVFE K IQRMELL+LSTLE Sbjct: 79 DDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLE 183
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 9.499e-35 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 D + LV+ R +A++W+ KV +HYGF++LTA+LA+NY DRF+ S FQ DKPWM QL A+ CLSLAAKVEE +VP LLD QVE A+YVFE K IQRMELLVLSTL+ Sbjct: 78 DDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLD 182
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.620e-34 Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 3 Query: 207 LVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 LV R EA++WVL+V +HYGF++LTAILA+NY DRF+ S Q DKPWM QL+AV LSLAAKVEE QVPLLLDLQVE A+Y+FE K IQRMELL+LSTL+ Sbjct: 92 LVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQ 192
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.329e-28 Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 D D+ + R +A++W+ KV+++Y F+ LTA LA+NYLDRFL + K WM QLLAV CLSLAAK+EET VP LDLQV +YVFE K IQRMELLVLSTL+ Sbjct: 95 DGDLDLRVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLK 199
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 4.274e-27 Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 201 DVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTL 506 D+ + R++A++W+LKV AHY F L L++NYLDRFL S+ DK W QLLAV+CLSLA+K+EET VP ++DLQVE K+VFE K I+RMELLV++TL Sbjct: 91 DLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTL 192
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.726e-26 Identity = 55/97 (56.70%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 219 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 R +A++W+ KV+++Y F L+ LA+NYLDRFL SF+ D+ WM QLL+V+CLSLA K+EET VPL +DLQV A+YVFE + I+RMEL+V+ TL+ Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLK 191
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 1.053e-25 Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 216 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 AR ++V W+LKV A+Y F LTA LA+NY+DRFL + W +QLLAV CLSLAAK+EE VP L D QV G KY+FE K I+RMELLVLS L+ Sbjct: 81 AREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLD 178
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 2.345e-25 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 216 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTL 506 AR+E+V W+LKV + GF LTA LA+NY+DRFL H + W +QLLAV CLSLAAK+EET VP LLDLQVE ++YVFE + I RME L+L+ L Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTAL 177
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 2.593e-24 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 3 Query: 207 LVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 LV RS+A++W+ KV+ Y F LTA+L++NYLDRFL F ++ M QLLAV LSLAAK+EET VP LDLQV AKYVFET+ I+RMEL VL+ L+ Sbjct: 86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALK 186
BLAST of CX299803 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.593e-24 Identity = 56/99 (56.57%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 219 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQI--DKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLE 509 R A++W+ KV A+Y F L A LA+NYLDRFL S F + D PWM QLL V CLSLAAK+EET P LDLQV +YVF+ + I RME++VL+TL+ Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLK 202 The following BLAST results are available for this feature:
BLAST of CX299803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299803 ID=CX299803; Name=CX299803; organism=Citrus clementina; type=EST; length=509bpback to top |