CX299805

Overview
NameCX299805
Unique NameCX299805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length537
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:377..913. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 3.458e-89
Identity = 152/176 (86.36%), Postives = 167/176 (94.89%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            IE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP
Sbjct:  108 IEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRP 283          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 9.504e-55
Identity = 101/177 (57.06%), Postives = 130/177 (73.45%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPL-KTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            ++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I + KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P
Sbjct:  107 VKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAP 283          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.079e-29
Identity = 73/182 (40.11%), Postives = 105/182 (57.69%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTR 533
            IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++ DP     V ND  T    DN YY+N+L +KGL   D  L  D RTR
Sbjct:  105 IESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSL-DP-TTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTR 284          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.689e-27
Identity = 68/176 (38.64%), Postives = 98/176 (55.68%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP LN      +   C +   +     ++  D  TP   DN Y++N+    GL+  DH L  D  TRP
Sbjct:  105 VTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFL--DPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRP 278          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.882e-27
Identity = 67/172 (38.95%), Postives = 101/172 (58.72%), Query Frame = 3
Query:   21 KEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD 521
            K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +  +RL     +  VDP ++P +   ++  C D  P+P AV  V  D  +    DN+YY+N++  KGL   D  L  D
Sbjct:  114 KTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAV--VDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFND 281          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.763e-27
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   21 KEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP     V ND  TP   DN Y++NI    GL+  DH L +D RTRP
Sbjct:  115 KTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTI--SVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRP 284          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 8.384e-27
Identity = 69/205 (33.66%), Postives = 103/205 (50.24%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAI--------PD------------------------PKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++        PD                         + +    N+ G        Y+R ++ NKGLM  D QL
Sbjct:  145 IDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQL 349          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.095e-26
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-------YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTR 533
            I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC     R        +  +D +L+  +   +++KC  +     +   V ND  T  V DN YYRN+  +KGL   D  L  D RTR
Sbjct:  103 IDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSS---ESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTR 281          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L
Sbjct:  108 IDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVL 272          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.097e-26
Identity = 69/179 (38.55%), Postives = 95/179 (53.07%), Query Frame = 3
Query:   21 KEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD R++P
Sbjct:  110 KEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKP 285          
The following BLAST results are available for this feature:
BLAST of CX299805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PER42_ARATH3.458e-8986.36Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH9.504e-5557.06Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER18_ARATH3.079e-2940.11Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER41_ARATH1.689e-2738.64Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER55_ARATH2.882e-2738.95Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER63_ARATH3.763e-2736.63Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER48_ARATH8.384e-2733.66Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER46_ARATH1.095e-2635.16Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER52_ARATH2.439e-2638.10Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER51_ARATH7.097e-2638.55Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC07002F07SK NTLeaf1 Citrus clementina cDNA clone C07002F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299805 ID=CX299805; Name=CX299805; organism=Citrus clementina; type=EST; length=537bp
GCACGAGGATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGT
GTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGT
TGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTA
GAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGAC
AGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCC
TGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTG
TGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCT
GACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCC
CAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGG
ACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTT
GATCATCAGCTAGCCACCGACAAGAGGACAAGACCTT
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