CX299821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_TOBAC (Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 4.708e-46 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKP 315 KFSTRGDIGTANIV RQNTTVDKPEEAT+IEM+EPVSLTFALRY+NSFT+ATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE+ETKP Sbjct: 168 KFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEETKP 264
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_SOYBN (Proliferating cell nuclear antigen (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 8.031e-46 Identity = 89/99 (89.90%), Postives = 98/99 (98.99%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQV 321 KFST+GDIGTANIV RQNT+VDKPEEAT+IEM+EPVSLTFALRYMNSFT+ATPLSNTVTISLS+ELPVVVEYKIAEMGY+RFYLAPKIEEDE++TKPQV Sbjct: 138 KFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDEEDTKPQV 236
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA1_DAUCA (Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.799e-45 Identity = 89/97 (91.75%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKP 315 KFSTRGDIGTANIV RQNTTVDKPEEAT+IEM+EPVSLTFALRYMNSFT+A+PLS+TVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE+EDE+KP Sbjct: 168 KFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEEEDESKP 264
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_PEA (Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.282e-43 Identity = 85/98 (86.73%), Postives = 96/98 (97.96%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQ 318 KFST+GDIG+ANIV RQNTTVDKPEEAT+IEM+EPV+L FALRYMNSFT+ATPLS++VTISLS+ELPVVVEYKIAEMGY+RFYLAPKIEEDE+ETKPQ Sbjct: 168 KFSTKGDIGSANIVCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDEEETKPQ 265
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_CATRO (Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43 Identity = 86/94 (91.49%), Postives = 92/94 (97.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 306 KFSTRGDIGTANIV RQNTTVDKP+EATIIEM+EPVSLTFALRY+NSFT+ATPLSN VTISLSSELPVVVEYKIAEMGYIRFYLAPKIEED++E Sbjct: 168 KFSTRGDIGTANIVCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDDEE 261
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_POPNI (Proliferating cell nuclear antigen OS=Populus nigra GN=PCNA PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.851e-42 Identity = 83/94 (88.30%), Postives = 92/94 (97.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 306 KFSTRGDIGTANIVLRQNTTVDKPE+AT+IEM+EPVS+TFALRYMNSFT+ATPLSNTVTIS+S +LPVVVEYKIAEMGY+RFYLAPK+EEDE E Sbjct: 168 KFSTRGDIGTANIVLRQNTTVDKPEDATVIEMNEPVSMTFALRYMNSFTKATPLSNTVTISMSPDLPVVVEYKIAEMGYVRFYLAPKMEEDEPE 261
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA2_ARATH (Proliferating cell nuclear antigen 2 OS=Arabidopsis thaliana GN=At2g29570 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.036e-42 Identity = 85/98 (86.73%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQ 318 KFST GDIGTANIVLRQNTTVDKPE+A +IEM+EPVSL+FALRYMNSFT+ATPLS TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEE+ED TKP+ Sbjct: 168 KFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED-TKPE 264
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_BRANA (Proliferating cell nuclear antigen OS=Brassica napus PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41 Identity = 82/94 (87.23%), Postives = 92/94 (97.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 306 KFST GDIGTANIVLRQNTTVDKPE+A +IEM+EPVSL+FALRYMNSFT+ATPLS+TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEEDE++ Sbjct: 168 KFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEDEED 261
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA1_ARATH (Proliferating cellular nuclear antigen 1 OS=Arabidopsis thaliana GN=PCNA PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 5.956e-41 Identity = 82/93 (88.17%), Postives = 90/93 (96.77%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 303 KFST GDIGTANIVLRQNTTVDKPE+A +IEM EPVSL+FALRYMNSFT+ATPLS+TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEE+ED Sbjct: 168 KFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_ORYSJ (Proliferating cell nuclear antigen OS=Oryza sativa subsp. japonica GN=Os02g0805200 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.956e-40 Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 303 KFST GDIGTANIV RQN TVDKPE+ATIIEM EPVSLTFALRYMNSFT+A+PLS VTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE+ Sbjct: 168 KFSTAGDIGTANIVCRQNKTVDKPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEE 260 The following BLAST results are available for this feature:
BLAST of CX299821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299821 ID=CX299821; Name=CX299821; organism=Citrus clementina; type=EST; length=537bpback to top |