CX299854

Overview
NameCX299854
Unique NameCX299854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299854 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.334e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = -1 
Query:  398 CTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSLDEEDSQASS 532
            CTQD CRVKKRVERLA+DPRMVITTYEGRH+HSPS   +D   S+
Sbjct:  248 CTQDKCRVKKRVERLADDPRMVITTYEGRHLHSPSNHLDDDSLST 292
The following BLAST results are available for this feature:
BLAST of CX299854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK13_ARATH2.334e-1375.56Probable WRKY transcription factor 13 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionC07003C03SK NTLeaf1 Citrus clementina cDNA clone C07003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299854 ID=CX299854; Name=CX299854; organism=Citrus clementina; type=EST; length=532bp
TTTTTTTTTGAATAAAATATGAGAGCTTTAACTTGCTTTTAGTACTTAAG
CATAGCAGTCTCGCTTTACAATATTGTGAGGCCCATTAAAGTAAAGAGCC
AAGTCCACATGATATACAAAATTACAGATGAAATGGCACGTTCGACTTTA
TAGTTACTAATAACATCAATAGATAGGAAATGAACTTTTTTCATTACATG
GAAAACTTAAAAAGGGTTAATAGAATGAGTATATATACTCTCAGGAAAAG
CTCGAACGATTTTTACCCGAAACCAACACATGCTGGTAAGTAGAGAGTAC
CTAAGGGCGCGAGAAAACTTTCTCCAAGGAACTCGGTAAAATAGCCACGT
AACTTCGGAAGAAGAGGTGCCCACTACCACAAGAGATTATTAAGTTGAGA
TGAAGCTTGTGAATCCTCTTCATCAAGTGATGGAGAGTGAACATGCCTGC
CTTCATATGTTGTAATCACCATTCTTGGATCTTCTGCTAATCTTTCCACC
CTTTTCTTAACTCTACAATTATCTTGTGTACA
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