CX299858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299858 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.225e-16 Identity = 52/104 (50.00%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 10 GMEVAEIDGAPRMVRINYFY*ILCTSVLFLIIRLNGGFC*FNLNLMILQGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 321 GMEVAEIDGAPRM GPTFGAMMISGQKAAHLALK+LGQPNA+DGT+ V V PE +LAA +++E DA Sbjct: 291 GMEVAEIDGAPRM------------------------------------GPTFGAMMISGQKAAHLALKSLGQPNALDGTY--VGGVHPELILAAADSAETADA 356
BLAST of CX299858 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.564e-16 Identity = 51/104 (49.04%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 10 GMEVAEIDGAPRMVRINYFY*ILCTSVLFLIIRLNGGFC*FNLNLMILQGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 321 GMEVAEIDGAPRM GPTFGAMMISGQKAAHLALKALG PNA+DG++ V + PE +LAA +++EI DA Sbjct: 287 GMEVAEIDGAPRM------------------------------------GPTFGAMMISGQKAAHLALKALGLPNALDGSY--VGGIHPELILAAADSAEIADA 352
BLAST of CX299858 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16 Identity = 50/104 (48.08%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 10 GMEVAEIDGAPRMVRINYFY*ILCTSVLFLIIRLNGGFC*FNLNLMILQGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 321 GMEVAEIDGAPRM GPTFGAMMISGQKAAHLALKALG+PNA+DGT EV+ E + A+++ E+VDA Sbjct: 287 GMEVAEIDGAPRM------------------------------------GPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKDDEVVDA 354
BLAST of CX299858 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.941e-15 Identity = 52/104 (50.00%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 10 GMEVAEIDGAPRMVRINYFY*ILCTSVLFLIIRLNGGFC*FNLNLMILQGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 321 GMEVAEIDGAPRM GPTFGAMMISGQKA LALKALG PNAIDGT V + PE VLAA +++E VDA Sbjct: 284 GMEVAEIDGAPRM------------------------------------GPTFGAMMISGQKAGQLALKALGLPNAIDGTL--VGNLSPELVLAAADSAETVDA 349
BLAST of CX299858 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14 Identity = 49/104 (47.12%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 10 GMEVAEIDGAPRMVRINYFY*ILCTSVLFLIIRLNGGFC*FNLNLMILQGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 321 GMEVAEIDGAPRM GPTFGAMMISGQKAAHLALKALG+PNA+DGT S E ++ A ++ E+VDA Sbjct: 290 GMEVAEIDGAPRM------------------------------------GPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLR---EELMIAYKDDEVVDA 354 The following BLAST results are available for this feature:
BLAST of CX299858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299858 ID=CX299858; Name=CX299858; organism=Citrus clementina; type=EST; length=516bpback to top |