CX299895

Overview
NameCX299895
Unique NameCX299895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length543
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig815 contig Ccv1_Contig815:1..543. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.209e-65
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            SYYTRYGGGAN LADGYSTG GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNK K WDD W+FWVGPFIGAAIAAFYHQF+LRA   K+LG
Sbjct:  149 SYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 279          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.062e-65
Identity = 118/131 (90.08%), Postives = 123/131 (93.89%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            SYYTRYGGGANELADGY+ G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN +KAWDDQW+FWVGP IGAA AAFYHQFILRA A+KALG
Sbjct:  149 SYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALG 279          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.594e-65
Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            +Y+TRYGGGAN L+DGYS G G+AAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKDKAWD  W+FWVGPF GAAIAAFYHQF+LRAGA+KALG
Sbjct:  148 AYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALG 278          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 2.978e-64
Identity = 116/131 (88.55%), Postives = 121/131 (92.37%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            SYY RYGGGAN LADGY+TG GLAAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNK K WDD W+FWVGPFIGAAIAAFYHQF+LRA   K+LG
Sbjct:  147 SYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 277          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.080e-64
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 389
            +YY RYGGGANEL+DGYS G GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  153 AYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 280          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.080e-64
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 389
            +YY RYGGGANEL+DGYS G GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  154 AYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 281          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 5.080e-64
Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            +Y+ RYGGGAN LA GYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAVIYNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG
Sbjct:  154 AYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALG 284          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 8.664e-64
Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            +YY RYGGGAN L+DGY+ GVG+ AEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARS GAAVIYN  KAWDDQW+FWVGPF+GAAIAAFYHQF+LRAGA+KA G
Sbjct:  148 TYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYG 278          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.132e-63
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 398
            +Y+ RYGGGAN LA GYS G GL AEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAV+YNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG
Sbjct:  156 AYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALG 286          
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 5.616e-63
Identity = 113/128 (88.28%), Postives = 119/128 (92.97%), Query Frame = 3
Query:    6 SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 389
            SYY RYGGGANEL+DGYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSLG AVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  153 SYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK 280          
The following BLAST results are available for this feature:
BLAST of CX299895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
PIP21_ARATH1.209e-6590.84Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP24_ARATH2.062e-6590.08Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH4.594e-6588.55Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ARATH2.978e-6488.55Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP24_MAIZE5.080e-6490.63Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE5.080e-6490.63Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_MAIZE5.080e-6487.02Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP26_ARATH8.664e-6485.50Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP22_MAIZE1.132e-6385.50Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP22_ORYSJ5.616e-6388.28Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC07003G01SK NTLeaf1 Citrus clementina cDNA clone C07003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299895 ID=CX299895; Name=CX299895; organism=Citrus clementina; type=EST; length=543bp
AAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGAGCTGGCCGAT
GGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGT
GTTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAG
ACTCCCATGTCCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTC
ATGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCCAGC
AAGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGGATG
ATCAATGGCTCTTCTGGGTTGGACCCTTCATCGGTGCAGCAATTGCGGCT
TTCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGGTTC
ATTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCGACAAGTGGATTATC
CACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGGGAA
GGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGG
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