CX300088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.235e-18 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAAYPA WLR AKFWP TGRVDNVYGDRNLICTLLP Sbjct: 982 KPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNLICTLLP 1023
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.396e-17 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAA+PA+WLR AKFWP TGRVDNVYGDRNL+CTLLP Sbjct: 1003 KPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLP 1044
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.460e-16 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAA+PA WLR +KFWP TGRVDNVYGDR L+CTLLP Sbjct: 985 KPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTLLP 1026
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.460e-16 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAA+PA WLR +KFWP TGRVDNVYGDRNL+CTL P Sbjct: 991 KPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQP 1032
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 981 KPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 981 KPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 981 KPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 1 KPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 KPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 984 KPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1025
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1 Query: 7 YSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 Y RE AAYPASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 920 YPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959
BLAST of CX300088 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1 Query: 7 YSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 126 Y RE AAYPASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 920 YPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959 The following BLAST results are available for this feature:
BLAST of CX300088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300088 ID=CX300088; Name=CX300088; organism=Citrus clementina; type=EST; length=363bpback to top |