CX300116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.791e-18 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 362 N LD +I ++L T PPA KE + LP + +TEE +G EC +CKE+ +G+ +++LPC H FH C+ PWL++H+SCP+CR L Sbjct: 186 NGLDTIITQLLNQFENTGP-PPADKEKIQALPTVPVTEE---HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.989e-18 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 362 N LD +I ++L T PPA KE + LP + +TEE +G EC +CK++ +G+++++LPC H FH C+ PWL++H+SCP+CR L Sbjct: 184 NGLDAIITQLLNQFENTGP-PPADKEKIQALPTVPVTEE---HVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 380 N LD +I ++L T PPA E + LP I +TEE +G EC +CKE+ VG+ +++LPC H FH C+ PWL++H++CP+CR L + A Sbjct: 182 NGLDTIITQLLNQFENTGP-PPADTEKIQALPTIQITEE---HVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 277
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.161e-17 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 380 N LD +I ++L T PPA E + LP I +TEE +G EC +CKE+ VG+ +++LPC H FH C+ PWL++H++CP+CR L + A Sbjct: 183 NGLDTIITQLLNQFENTGP-PPADNEKIQALPTIQITEE---HVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 278
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.516e-17 Identity = 39/102 (38.24%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 87 LDDVIPEIL-ETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYES 389 LD ++ ++L + ++ P PPA KE + LP +T+T+E +D EC +CKE+ V +++++LPC H FH C+ PWL+ H++CP+CR L +D +S Sbjct: 185 LDAIVTQLLGQLENTGP--PPADKEKITSLPTVTVTQEQVDM---GLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQS 281
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.516e-17 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 380 N LD +I ++L T PPA + + LP I +TEE +G EC +CKE+ VG+ +++LPC H FH C+ PWL++H++CP+CR L + A Sbjct: 183 NGLDTIITQLLNQFENTGP-PPADTDKIQALPTIQITEE---HVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 278
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.980e-17 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 105 EILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESW 392 + E D P PPASK+VV LP +T+T E D +C +C G+ +++LPC+H FH C+ PWL + NSCP+CRHEL TD YE + Sbjct: 43 DFTEWDQRLP--PPASKKVVESLPKVTVTPEQADAA---LKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPDYEEF 133
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.980e-17 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 81 NNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 362 N LD +I ++L T PPA KE + LP + +TEE +G EC +CK++ +G+ +++LPC H FH C+ PWL++H+SCP+CR L Sbjct: 187 NGLDAIITQLLNQFENTGP-PPADKEKIQALPTVPVTEE---HVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.586e-17 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 105 EILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESW 392 + E D P PPA+K+VV LP +T+T E D +C +C G+ +++LPC+H FH C+ PWL + NSCP+CRHEL TD YE + Sbjct: 43 DFTEWDQRLP--PPAAKKVVESLPKVTVTPEQADAA---LKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDSPEYEEY 133
BLAST of CX300116 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.586e-17 Identity = 38/97 (39.18%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 87 LDDVIPEIL-ETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDD 374 LD ++ ++L + ++ P PPA KE + LP +T+T+E ++ EC +CKE+ V +K+++LPC H FH C+ PWL+ H++CP+CR L +D Sbjct: 186 LDAIVTQLLGQLENTGP--PPADKEKITSLPTVTVTQE---QVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED 277 The following BLAST results are available for this feature:
BLAST of CX300116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300116 ID=CX300116; Name=CX300116; organism=Citrus clementina; type=EST; length=527bpback to top |