CX300129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U737_TOBAC (UPF0737 protein mc410 OS=Nicotiana tabacum GN=MC410 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.213e-53 Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 17 QIHPSYAGRGPQNSDKHSDGIKIPQATMQSIGRNSSEAAQFDGRTIEWAKGEGKQHAAEEGSSARAED-VKVSGMNHRANDISDRSTPEGLSLDLSAIKPGIAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFVRHAS 508 Q+HPS+ GRGP SDK DG I QA SI SS++ Q+DGR +E KG G+QH AEE S++R E+ VK S ++ RA D D+ E + + S I+PG+AA++KFGG GS PNLPWVSTTG GPNGRTISGVTYRYSS QIRIVCACHGSHMSP++FVRHAS Sbjct: 321 QLHPSH-GRGPLGSDKQKDGPNISQAAASSIPHKSSDSVQYDGRAMEHVKGNGRQHKAEETSNSRGEENVKGSNISFRAKDPPDQPRAEAVPSEFSTIRPGLAADLKFGGSGSYPNLPWVSTTGPGPNGRTISGVTYRYSSTQIRIVCACHGSHMSPDDFVRHAS 484
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U7375_ARATH (UPF0737 protein At4g28910 OS=Arabidopsis thaliana GN=AFPH2 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.189e-38 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 161 AKGEGKQHAAEEGSSARAEDVKVSGMNHRANDISDRSTPEGLSLDLSAIKPGIAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFVRHASD 511 AKGEGKQ AEEGSS A + + +G N N S D SAIKPG+AA++KFGG G+ PNLPWVSTTGSGP+GRTISGVTYRY++NQI+IVCACHGSHMSPEEFVRHAS+ Sbjct: 300 AKGEGKQPVAEEGSSEDASE-RPTGDNSNLNT--------AFSFDFSAIKPGMAADVKFGGSGARPNLPWVSTTGSGPHGRTISGVTYRYNANQIKIVCACHGSHMSPEEFVRHASE 407
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U7378_MAIZE (UPF0737 protein 8 OS=Zea mays PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 188 AEEGSSARAEDVKV---SGMNHRANDISDRSTPEGLSLDLSAIKPGIAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFVRHAS 508 A++ + + +D K +G + A+ ++ GLSL SAI+PGIA +KFGG GS P+LPWVST G+GPNGRTISGVTY++ N+++IVCACHG+HMSPEEF+RHAS Sbjct: 343 ADQTGTKQVDDGKKPQEAGASSSAHAEDEKKADRGLSLMGSAIRPGIAPNVKFGGSGSYPDLPWVSTIGAGPNGRTISGVTYKFGRNEVKIVCACHGTHMSPEEFMRHAS 452
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U7377_MAIZE (UPF0737 protein 7 OS=Zea mays PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.162e-30 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 188 AEEGSSARAEDVKV---SGMNHRANDISDRSTPEGLSLDLSAIKPGIAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFVRHAS 508 A++ + + +D K +G + A+ ++ GLSL SAI+PGIA +KFGG GS P+LPWVST G+GPNGRTISGVTY++ N+++IVCACHG+HMSPEEF+RHAS Sbjct: 343 ADQTGTKQVDDGKKPREAGASSSAHAEDEKKADRGLSLMGSAIRPGIAPNVKFGGSGSYPDLPWVSTIGAGPNGRTISGVTYKFGRNEVKIVCACHGTHMSPEEFMRHAS 452
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U7374_ORYSJ (UPF0737 protein Os05g0558800 OS=Oryza sativa subsp. japonica GN=Os05g0558800 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.555e-29 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 191 EEGSSARAEDVKVS---GMNHRANDISDRSTPEGLSLDLSAIKPGIAAEIKFGGCGSCPNLPWVSTTGSGPNGRTISGVTYRYSSNQIRIVCACHGSHMSPEEFVRHAS 508 E ++A+D K + G + A D+ + L L SAI+PGIA +KFGG GS P+LPWVSTTG+GPNGRTISGVTY++ N+++IVCACHG+HM+PEEF+RHAS Sbjct: 317 ERAGISQADDGKKTQEAGASSSALVEDDKKSDRALPLMGSAIRPGIAPNVKFGGSGSYPDLPWVSTTGTGPNGRTISGVTYKFGRNEVKIVCACHGTHMTPEEFMRHAS 425
BLAST of CX300129 vs. ExPASy Swiss-Prot
Match: U7373_ARATH (UPF0737 protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 359 NLPWVSTTGSGPNGRTISGVTYRY-SSNQIRIVCACHGSHMSPEEFVRHA 505 ++P+VSTTG GPNG+ I+G YRY ++RIVC CHGS +SP EFV+HA Sbjct: 162 DMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHA 211 The following BLAST results are available for this feature:
BLAST of CX300129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300129 ID=CX300129; Name=CX300129; organism=Citrus clementina; type=EST; length=512bpback to top |