CX300147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 8.550e-48 Identity = 92/114 (80.70%), Postives = 105/114 (92.11%), Query Frame = 3 Query: 3 HLIVREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 HLI++EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRAS+VMA+LS Sbjct: 140 HLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAILS 253 HSP 2 Score: 70.8626 bits (172), Expect = 3.394e-12 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 6 LIVREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 L+V+ VV T +KPL DRV +K+ EAEE T GG+LL ++ KP G V+AVG G + N+ +++ G ++YSKYAG + + +D ++ L+ +++ +L Sbjct: 47 LVVKAASVVAPKYTS----IKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGK-NKIDITVPTGAQIIYSKYAGTEVEFND-VKHLILKEDDIVGIL 152
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.509e-44 Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = 3 Query: 3 HLIVREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 HLIV+EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS GTV+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR S+VMAVLS Sbjct: 142 HLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVLS 255 HSP 2 Score: 69.3218 bits (168), Expect = 9.874e-12 Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 39 LETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 + T + +KPL DRV IK EE T G+ L A+++KP G V+A+G G + G++K P+++ G V+YSKY G + + DG++++ ++ +++ +L Sbjct: 56 ITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSG--KKVGDKKLPVAVKTGAEVVYSKYTGTEIE-VDGSSHLIVKEDDIIGIL 154
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 6.170e-22 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 6.170e-22 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.795e-21 Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 344 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.062e-21 Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + LKPL DRVF+KV+E+EE TAGG+LL +++KEKP IG V+AVG G +++G+R + + G+ V+YSKYAG D K S G +Y+ L +++A ++ Sbjct: 8 VSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLS-GDDYVLLSEKDILATVA 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.062e-21 Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + +KPL DRVF+KV+ +EE TAGG+ L +A+KEKP IG V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G ++ L +++A +S Sbjct: 8 VTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIK-LGGEEFVLLSEKDILAAVS 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.062e-21 Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 335 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G +Y+ L +++A Sbjct: 8 VSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILA 100
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.999e-21 Identity = 47/97 (48.45%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+E+G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103 The following BLAST results are available for this feature:
BLAST of CX300147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300147 ID=CX300147; Name=CX300147; organism=Citrus clementina; type=EST; length=479bpback to top |