CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 2.477e-44 Identity = 89/117 (76.07%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 VLP LKGKLNGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+ Sbjct: 285 VLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 1.229e-43 Identity = 88/117 (75.21%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 VLP LKGKLNGIALRVPTPN SKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 280 VLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.739e-43 Identity = 87/117 (74.36%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 VLP LKGKLNGIALRVPTPN SKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 117 VLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 1.359e-42 Identity = 87/117 (74.36%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 VLP LKGKLNGIALRVPTPN SKKTFAEEVN AFRESA EL GILSVCDEPLVSVDFRC MGDD+VKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 289 VLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.092e-39 Identity = 81/117 (69.23%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 VLP LKGKLNGIALRVPTPN SKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC MGDDMVKVI+WYDNEWGYSQRVVDLADI AN WK Sbjct: 287 VLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.653e-38 Identity = 79/114 (69.30%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 11 ALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 AL+G + LRVPTPN SKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN WK Sbjct: 279 ALRGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.008e-37 Identity = 78/117 (66.67%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 349 VLP LKGKLNGIALRVPTPN +KK AE+VNAAFR++AD LKG+L+VCDEPLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VANNW Sbjct: 275 VLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 9.435e-36 Identity = 76/117 (64.96%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 349 VLP LKGKLNGIALRVPTPN +KK AE+VNAAFR++A+ LKGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VAN W Sbjct: 306 VLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 9.435e-36 Identity = 72/116 (62.07%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 349 VLP+LKGKLNGIALRVPTP KKTFAEEVNAAFRE+A+ +KG+L V D PLVS+DF+C MGDDMVKV+AWYDNEWGYSQRVVDLA++ A W Sbjct: 257 VLPSLKGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAEVTAKKW 372
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 3.035e-34 Identity = 73/117 (62.39%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 349 VLP LKGKLNGIALRVPTPN KK AE+VN AFR++A+ +KGIL VCD PLVSVDFRC MGDDMVKV+AWYDNEWGYSQRVVDLA +VA+ W Sbjct: 302 VLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |