CX300228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.015e-32 Identity = 79/143 (55.24%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 57 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLP-LKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 GLRG+S QAVLEGS Q+SG NRL+ P+ SRVAV + G +RAQQ S E ETSRRAM+G VAAG+ASGSFV+AVLA+A PI V T NSD+ RD LP K+RF++QPL P +ILNVK+ ID Sbjct: 10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFID 150
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 1.046e-29 Identity = 77/144 (53.47%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 57 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA--RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 GLRG+S QAVLEGS Q++G NRLN SRV+V R+G +RAQQ + PE+SRR++IGLVAAG+A GSFV+AV A+A PIKV T NSD+ RD L LK+RF+IQPLSP K+I+NVK ID Sbjct: 10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFID 148
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 2.666e-25 Identity = 77/144 (53.47%), Postives = 92/144 (63.89%), Query Frame = 3 Query: 57 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA-RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKV-XXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 GL G+S AVLEGS +++G +RLN + RVAVA RS VRAQQ+ ETSRR++IGLVAAG+A GSFVQAVLADA IKV T NSD+ RD L LK+RF++QPL P KDI+NVK LID Sbjct: 6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLID 142
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.547e-25 Identity = 72/145 (49.66%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 78 SQAVLEGSSQL-SGPNRLNAPSNSRVAVARSGFTVRAQQ---------ASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 + +LEGS QL SG NR + S+SR F VRAQQ ++ +P+++RRAM+GLVA G+AS SFVQAVLA+A PIKV TLNSDE RDL LPLKERF+IQPLSP K+I+ VK+ ID Sbjct: 6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFID 148
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 93 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 +G +GP R A SR+AV VRA A+ + +T RRA++GLVA G+A G+ QA LA+A PIK+ TLNSD+ RD DLPL+ERF++QPL P +DI+N+K LI+ Sbjct: 13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIE 135
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 93 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 +G +GP R A SR+AV VRA A+ + +T RRA++GLVA G+A G+ QA LA+A PIK+ TLNSD+ RD DLPL+ERF++QPL P +DI+N+K LI+ Sbjct: 13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIE 135
BLAST of CX300228 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 55/139 (39.57%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 72 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNE-PETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELID 482 + + A + G SQ P+R A S +R AV VRA + + RRA+IGLVA G+ G+ QA A+ IK+ TLNSD+ RD DLPLKERF++QPL P +DI+N+K LID Sbjct: 2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLID 135 The following BLAST results are available for this feature:
BLAST of CX300228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300228 ID=CX300228; Name=CX300228; organism=Citrus clementina; type=EST; length=484bpback to top |