CX300245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20 Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 409 MKVIAA+LLA+LGGN P+ +DLK+IL SVGA+ADD++IE LLS+VKGKDITELIASGRE+L D+++GFSLFD Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERLASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEEESDEELGFSLFD 112
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20 Identity = 47/62 (75.81%), Postives = 58/62 (93.55%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MKVIAAYLLAVLGGN P+ADD+K+IL SVGAEAD+E++EFLL+E+K KDITE+IA+GRE+L Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19 Identity = 54/112 (48.21%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 409 MK +AAYLLAVL GNA PSADDL IL SVG E D+E++E LLS++ GKDITELIA+GREK DDDMGFSLFD Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MKV AA+LLAVLGGNA PSAD++K+I+G+VGA+ D E IE LL EV GKDI ELIASGREKL Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.189e-17 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MKV+AAYLLAVL G A P++ D+K ILGSVGAE +D +IE LL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.648e-17 Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MKV+AA+LLAVL G A P+ D+K+ILGSVGAE +D +IE LL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16 Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 M+ +AAYLLAVLGGNA PSA D+K ILGSVG +A+DER+ ++ E+KGKDI E++A+GR KL Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA23_ARATH (60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana GN=RPP2C PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.606e-14 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MKVIAA+LLA LGGN P+++DLK IL SVGAE D+ +I+ L S +K D+TELIA+GREK+ Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKM 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2_ALTAL (60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14 Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MK +AAYLL LGGN PSA D+K +L SVG EAD +R++ L+SE++GKDI ELIASG EKL Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKL 62
BLAST of CX300245 vs. ExPASy Swiss-Prot
Match: RLA2_CLAHE (60S acidic ribosomal protein P2 OS=Cladosporium herbarum GN=CLAH5 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 4.674e-14 Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 74 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 259 MK +AA+LL L GN+ PSA+D+K +L SVG +AD+ER+ LL E++GKDI ELI+SG EKL Sbjct: 1 MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKL 62 The following BLAST results are available for this feature:
BLAST of CX300245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300245 ID=CX300245; Name=CX300245; organism=Citrus clementina; type=EST; length=602bpback to top |