CX300356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300356 vs. ExPASy Swiss-Prot
Match: YK4P_CAEEL (UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13 Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 1 Query: 25 FESRKPLPAQWQGLRDDELSKEAGIPGCVFVHMSGFIGGNKSYGG 159 FE+R PLPA W+GLRDD+LSKE+GIPG VFVH+SGFIGGN + G Sbjct: 272 FENRMPLPAAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREG 316
BLAST of CX300356 vs. ExPASy Swiss-Prot
Match: YIW4_SCHPO (UPF0160 protein C694.04c OS=Schizosaccharomyces pombe GN=SPAC694.04c PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13 Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 1 Query: 1 AVAVSPDRFESRKPLPAQWQGLRDDELSKEAGIPGCVFVHMSGFIGGNKSYGG 159 AV++ P F R PLP W+G+RD++LS+ GIPGC+FVH SGFIGGN+++ G Sbjct: 258 AVSIDPTSFTCRLPLPEPWRGIRDEKLSELTGIPGCIFVHASGFIGGNQTFEG 310
BLAST of CX300356 vs. ExPASy Swiss-Prot
Match: MYG1_RAT (UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 4 VAVSPDRFESRKPLPAQWQGLRDDELSKEAGIPGCVFVHMSGFIGGNKSYGG 159 V P F+SR PLP W+GLRD+ L + +GIPGC+FVH SGFIGG+ + G Sbjct: 306 VPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHHTREG 357
BLAST of CX300356 vs. ExPASy Swiss-Prot
Match: MYG1_HUMAN (UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 4 VAVSPDRFESRKPLPAQWQGLRDDELSKEAGIPGCVFVHMSGFIGGNKSYGG 159 V P F+SR PLP W+GLRD+ L + +GIPGC+FVH SGFIGG+ + G Sbjct: 306 VPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHPTREG 357
BLAST of CX300356 vs. ExPASy Swiss-Prot
Match: MYG1_MOUSE (UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1 Query: 4 VAVSPDRFESRKPLPAQWQGLRDDELSKEAGIPGCVFVHMSGFIGGNKSYGG 159 V P F+SR PLP W+GLRD L + +GIPGC+FVH SGFIGG+ + G Sbjct: 305 VPKEPHSFQSRLPLPEPWRGLRDKALDQVSGIPGCIFVHASGFIGGHHTREG 356 The following BLAST results are available for this feature:
BLAST of CX300356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300356 ID=CX300356; Name=CX300356; organism=Citrus clementina; type=EST; length=453bpback to top |