CX300381

Overview
NameCX300381
Unique NameCX300381
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length525
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.107e-12
Identity = 47/118 (39.83%), Postives = 61/118 (51.69%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     IGAGVR+   IIL G  + +++ V N+IVGW+S+IG+W+RV+         D  AK+              ITIL             NSIVLP+K LN S   +IIL
Sbjct:  305 PNVSIGTGVTIGAGVRVRESIILHGATLQDHSCVLNSIVGWESTIGKWARVEGTPSDPNPNDPYAKIDSETLFRDGKLTPSITILGCNVNIPSEVIILNSIVLPHKDLNRSFKNQIIL 422          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAEGDF-------NAKLGITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            P+V I  N +IG GVR+I  IILD  EI ++A +  +I+GW+S IG W+R++   ++       + + G+TI             +N IV+P+K L+ + + EIIL
Sbjct:  307 PDVYIGPNVKIGKGVRVIHSIILDQTEIKDHACIIYSIIGWQSLIGVWARIEGIPNYTPFLYSQDKRRGVTIFGAGAQANGEIIVSNCIVMPHKQLDRNYNNEIIL 412          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.599e-11
Identity = 45/118 (38.14%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     IG GVR+   IIL G  + ++  V N+IVGW S++G+W+RV+         D  AK+              ITIL             NSIVLP+K LN S   +IIL
Sbjct:  305 PNVSIGKGVTIGGGVRVRESIILHGAVLQDHCCVLNSIVGWDSTVGKWARVEGTPSDPNPNDPYAKIDSETLFRDGGLTPSITILGCNVNIPSEVIIRNSIVLPHKDLNRSFKNQIIL 422          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     +GAGVR+   I+L G  + +++ V N IVGW S++GRW+RV+         D  +K+              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  304 PNVSIGMGVTVGAGVRIRESIVLHGAVLQDHSCVLNTIVGWDSTVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRSFKNQIIL 421          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVS+     +GAGVR+   IIL G  + +++ V N IVGW S +GRW+RV+         D  +K+              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  309 PNVSVGMGVTVGAGVRIRESIILHGAVLQDHSCVLNTIVGWDSMVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRSFKNQIIL 426          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: MPG1_CRYNE (Mannose-1-phosphate guanyltransferase OS=Cryptococcus neoformans GN=MPG1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNV I  +A+IG GVRL  C+I+    + +++ + N+IVGW S++GRW+RV+          IT+L              + VLP+K+++ S+ +  I+
Sbjct:  274 PNVVIGPDAKIGPGVRLQRCVIMSNATVRDHSWIANSIVGWNSTVGRWTRVE---------NITVLGDDVTIKDELYVNGASVLPHKSISTSITEPRIV 363          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 44/118 (37.29%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     IG GVRL   I+L G  + E+  V ++IVGW S++GRW+RV+         D  A++              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  303 PNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL 420          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 44/118 (37.29%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     IG GVRL   I+L G  + E+  V ++IVGW S++GRW+RV+         D  A++              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  303 PNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL 420          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     +G GVRL   I+L G  + E+  V ++IVGW S++GRW+RV+         D  A++              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  303 PNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL 420          
BLAST of CX300381 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3
Query:    3 PNVSISANARIGAGVRLISCIILDGVEIMENAVVTNAIVGWKSSIGRWSRVQA------EGDFNAKL-------------GITILXXXXXXXXXXXXTNSIVLPNKTLNVSVHQEIIL 299
            PNVSI     +G GVRL   I+L G  + E+  V ++IVGW S++GRW+RV+         D  A++              ITIL             NSIVLP+K L+ S   +IIL
Sbjct:  303 PNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL 420          
The following BLAST results are available for this feature:
BLAST of CX300381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GMPAA_DANRE1.107e-1239.83Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_DICDI7.177e-1235.85Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPAB_DANRE1.599e-1138.14Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]
GMPPA_XENTR2.727e-1136.44Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAB_XENLA4.652e-1136.44Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
MPG1_CRYNE6.075e-1133.33Mannose-1-phosphate guanyltransferase OS=Cryptococ... [more]
GMPPA_RAT6.075e-1137.29Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPPA_MOUSE6.075e-1137.29Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_PAPAN7.935e-1136.44Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_HUMAN7.935e-1136.44Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
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Properties
Property NameValue
Genbank descriptionC07009E10SK SaltLeaf1 Citrus clementina cDNA clone C07009E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300381 ID=CX300381; Name=CX300381; organism=Citrus clementina; type=EST; length=525bp
GTCCCAATGTCTCAATTTCTGCCAATGCTCGTATAGGAGCAGGCGTAAGG
CTCATTAGTTGCATCATACTTGACGGAGTTGAGATCATGGAAAATGCAGT
TGTTACTAATGCAATTGTTGGGTGGAAGTCTTCTATTGGTAGATGGTCCC
GTGTTCAGGCTGAAGGAGATTTCAATGCTAAACTCGGGATCACAATCCTT
GGTGAGGCTGTGGGTGTTGAAGATGAAGTAGTTGTGACTAACAGCATTGT
CCTTCCAAACAAAACACTCAATGTTAGTGTTCATCAGGAAATTATCCTAT
GATAGAGCTCCACATATCCCACACCAAAGGTTACTTTTGGGCTCTCCGTG
TATTTCCCTTTATTATTGATTTATTGTCATGATTTCTCTTTTTACTGTTT
TCCAAATTTCAAGTAGAAACACCGACATTTAAATTTAAAATAGTTCAGCA
CCCATTTGTAAATTGAGATTTGGCTGTTGGAATAAAAATTTTGACTATTG
GCTACTTAAAAAAAAAAAAAAAAAA
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