CX300447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL1_ARATH (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana GN=FIB1 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.007e-63 Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRH GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTKVEYR+WNPFRSKLAAA+LGGVDNIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPII Sbjct: 73 PHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPII 198
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL2_ARATH (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana GN=FIB2 PE=1 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 2.931e-63 Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRH GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTK EYR+WNPFRSKLAAA+LGGVDNIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPII Sbjct: 84 PHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPII 209
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_SCHPO (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe GN=fib1 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.840e-57 Identity = 103/126 (81.75%), Postives = 118/126 (93.65%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRH GVFIA+GKED LVT+NLV GE+VYNEKRISV + DGTKVEYR+WNPFRSKLAA +LGG+DNI+IKPG RVLYLGAA+GT+VSHV+D+VGP G+VYAVEFSHRSGRDL+NMAKKRTNVIPI+ Sbjct: 77 PHRHAGVFIARGKEDLLVTRNLVPGESVYNEKRISVDSPDGTKVEYRVWNPFRSKLAAGILGGLDNIYIKPGARVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIV 202
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 1.458e-54 Identity = 101/126 (80.16%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+I Sbjct: 96 PHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVI 220
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 1.458e-54 Identity = 101/126 (80.16%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+I Sbjct: 96 PHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVI 220
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 1.458e-54 Identity = 101/126 (80.16%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+I Sbjct: 90 PHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVI 214
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_XENLA (rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis GN=fbl PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 2.487e-54 Identity = 103/127 (81.10%), Postives = 115/127 (90.55%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDG-TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEG+FI +GKEDALVTKNLV GE+VY EKRISV EDG K EYR WNPFRSK+AAA+LGGVD I IKPGV+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IP+I Sbjct: 92 PHRHEGIFICRGKEDALVTKNLVPGESVYGEKRISV--EDGEVKTEYRAWNPFRSKIAAAILGGVDQIHIKPGVKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPVI 216
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_DROER (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.612e-53 Identity = 100/126 (79.37%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEGVFIA+GKEDALVT+N V G VY EKRISV+N +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPII Sbjct: 116 PHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPII 240
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 8.000e-53 Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = 2 Query: 2 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 PHRHEGVFIA+GKEDALVT+N V G VY EKRISV+ +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPII Sbjct: 115 PHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPII 239
BLAST of CX300447 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 5.733e-51 Identity = 96/125 (76.80%), Postives = 113/125 (90.40%), Query Frame = 2 Query: 5 HRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPII 379 HR EGVFI KG+++ALVTKN GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG +VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII Sbjct: 70 HRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPII 193 The following BLAST results are available for this feature:
BLAST of CX300447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300447 ID=CX300447; Name=CX300447; organism=Citrus clementina; type=EST; length=380bpback to top |