CX300483

Overview
NameCX300483
Unique NameCX300483
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length363
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300483 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.555e-24
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 2 
Query:    2 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 163
            ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  217 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
[Close]
BLAST of CX300483 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.555e-24
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 2 
Query:    2 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 163
            ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK
Sbjct:  217 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
The following BLAST results are available for this feature:
BLAST of CX300483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CB12_SOLLC1.555e-2494.44Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB12_PETHY1.555e-2494.44Chlorophyll a-b binding protein, chloroplastic OS=... [more]
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Properties
Property NameValue
Genbank descriptionC07010G02SK SaltLeaf1 Citrus clementina cDNA clone C07010G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300483 ID=CX300483; Name=CX300483; organism=Citrus clementina; type=EST; length=363bp
GGAGCTGAGGACTAAGGAGATCAAGAATGGAAGATTGGCTATGTTGGCTG
TGATGGGTGCTTGGTTCCAGCACATTTACACCGGCACCGGCCCCATTGAC
AATCTCATTGCCCACCTTGCTGATCCTGGTCATGCCACCGTTTTTGCTGC
CTTCACCCCCAAGTGAGATGATGACGAGCAAAGGGAGAGAAATTTGGGCC
AAGAGGAAGCTTGAGATCAAAGGAATTGGTGTTTCTCTTAGGGAAAGGTT
GTATGATTAGAACTTGTATTAATTGCCTCTATCTATGTACAAAGACTTGT
GTGATCACTTAGATGCCATGAATATAAAAAATATTCAGGTGGAAAAAAAA
AAAAAAAAAAAAA
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