CX300647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_DICDI (Probable Ufm1-conjugating enzyme 1 OS=Dictyostelium discoideum GN=ufc1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.719e-49 Identity = 90/157 (57.32%), Postives = 109/157 (69.43%), Query Frame = 1 Query: 22 QGFDRLTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDD 492 Q + ++NK DNDWF I + NP GTRW GKCWY++N KYEFDL+FD+PVTYP TAPE+ +P+LDGKT+K MYRGGKICLT+HFKPLW++N P FGIAHAL LGLAPWLAAE+P LVD+G+IKHK+D Sbjct: 36 QALIKYVEINKKADNDWFNIES-NPLGTRWQGKCWYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEK----------------------------MYRGGKICLTIHFKPLWSRNVPHFGIAHALALGLAPWLAAEVPHLVDNGIIKHKED 163
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_BOVIN (Ufm1-conjugating enzyme 1 OS=Bos taurus GN=UFC1 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.546e-47 Identity = 90/166 (54.22%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 4 QRLKWS-QGFDRLTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDDVS 498 QRLK Q R + NK+ DNDWFR+ + N EGTRW GKCWY+H+LLKYEFD++FDIP+TYP TAPE+ +P+LDGKT K MYRGGKICLT HFKPLWA+N P+FG+AH + LGL PWLA EIP L+ G+I+HK+ S Sbjct: 30 QRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAK----------------------------MYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCS 166
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_HUMAN (Ufm1-conjugating enzyme 1 OS=Homo sapiens GN=UFC1 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 7.754e-47 Identity = 89/163 (54.60%), Postives = 109/163 (66.87%), Query Frame = 1 Query: 4 QRLKWS-QGFDRLTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKD 489 QRLK Q R + NK+ DNDWFR+ + N EGTRW GKCWY+H+LLKYEFD++FDIP+TYP TAPE+ +P+LDGKT K MYRGGKICLT HFKPLWA+N P+FG+AH + LGL PWLA EIP L+ G+I+HK+ Sbjct: 30 QRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAK----------------------------MYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKE 163
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_MOUSE (Ufm1-conjugating enzyme 1 OS=Mus musculus GN=Ufc1 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.256e-46 Identity = 87/166 (52.41%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 4 QRLKWS-QGFDRLTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDDVS 498 QRLK Q R + NK++DNDWFR+ + N EGTRW GKCWY+H+ LKYEFD++F+IP+TYP TAPE+ +P+LDGKT K MYRGGKICLT HFKPLWA+N P+FG+AH + LGL PWLA E+P L+ G+I+HK+ S Sbjct: 30 QRLKEEYQSLIRYVENNKNSDNDWFRLES-NKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAK----------------------------MYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVIQHKEKCS 166
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_RAT (Ufm1-conjugating enzyme 1 OS=Rattus norvegicus GN=Ufc1 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.573e-46 Identity = 86/163 (52.76%), Postives = 108/163 (66.26%), Query Frame = 1 Query: 4 QRLKWS-QGFDRLTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKD 489 QRLK Q R + NK+ DNDWFR+ + N EGTRW GKCWY+H+ LKYEFD++F+IP+TYP TAPE+ +P+LDGKT K MYRGGKICLT HFKPLWA+N P+FG+AH + LGL PWLA E+P L+ G+I+HK+ Sbjct: 30 QRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAK----------------------------MYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVIQHKE 163
BLAST of CX300647 vs. ExPASy Swiss-Prot
Match: UFC1_CAEEL (Probable Ufm1-conjugating enzyme OS=Caenorhabditis elegans GN=C40H1.6 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.976e-42 Identity = 79/148 (53.38%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 43 QMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKVXXXXXXXXXXXXXXXXXXXXXXXWRL*MYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHK 486 Q NK D DWF++ + N GT+W GKCWY HN++KYEFD++FDIP+TYP TAPE+ LP+LDGKT K MYRGGKICL+ HFKPLWA+N P+FGIAHA LGL PW+A EIP L++ G+I+ K Sbjct: 43 QNNKDCDRDWFQLES-NERGTKWFGKCWYFHNMVKYEFDVEFDIPITYPVTAPEIALPELDGKTAK----------------------------MYRGGKICLSEHFKPLWARNTPKFGIAHAFALGLGPWMAVEIPDLIEKGLIQPK 161 The following BLAST results are available for this feature:
BLAST of CX300647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300647 ID=CX300647; Name=CX300647; organism=Citrus clementina; type=EST; length=629bpback to top |