CX300651

Overview
NameCX300651
Unique NameCX300651
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length533
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300651 vs. ExPASy Swiss-Prot
Match: IPT5_ARATH (Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT5 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.735e-20
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:    3 KLLEAAINKIKENTCNLPCRQLQKIHRLNDIWNWNMHRIDATEVFLKRGEEADEAWE 173
            +LLE AI KIKENTC L CRQLQKI RL   W WNMHR+DATEVFL+RGEEADEAW+
Sbjct:  226 RLLETAIEKIKENTCLLACRQLQKIQRLYKQWKWNMHRVDATEVFLRRGEEADEAWD 282
[Close]
BLAST of CX300651 vs. ExPASy Swiss-Prot
Match: IPT7_ARATH (Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis thaliana GN=IPT7 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.199e-13
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 3 
Query:    3 KLLEAAINKIKENTCNLPCRQLQKIHRLNDIWNWNMHRIDATEVFLKRG-EEADEAWE 173
            K+L+ A+  IK+NT  L CRQL+KI RL+  W  +MHR+DATEVFLKR  EE DEAWE
Sbjct:  226 KMLDVAVKNIKKNTEILACRQLKKIQRLHKKWKMSMHRVDATEVFLKRNVEEQDEAWE 283
The following BLAST results are available for this feature:
BLAST of CX300651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IPT5_ARATH5.735e-2077.19Adenylate isopentenyltransferase 5, chloroplastic ... [more]
IPT7_ARATH5.199e-1362.07Adenylate isopentenyltransferase 7, mitochondrial ... [more]
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Properties
Property NameValue
Genbank descriptionC07012F10SK SaltLeaf1 Citrus clementina cDNA clone C07012F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300651 ID=CX300651; Name=CX300651; organism=Citrus clementina; type=EST; length=533bp
CTAAACTTCTCGAGGCAGCCATTAACAAAATTAAAGAAAATACATGTAAC
CTACCTTGTCGCCAATTACAAAAAATTCATAGGCTCAACGACATATGGAA
TTGGAACATGCATCGAATTGATGCCACGGAGGTGTTCTTAAAACGAGGCG
AAGAAGCTGATGAAGCGTGGGAGAAGCCTCGTGATGCTACCCAGTACCAT
GACTGTTCGTCAATTCCTCTACGACGAAGATCGTGTGGCCACTATGCCGG
AAACCGCCCCGGCTATCGTCAACACTCCACCGGTCCCTATTCCCACCGCT
GTTGCTGCCGCAACCCGTTGAAAGAATATTGGGACCCACATAATCTACGG
CGAAATGCGTGTGATGATGCCATGTAGCATTTTGTCACATAGCAAATTAG
CAAGTTTTTGGCACTTTCTCTTACTTTTCTCATAATCTTGAGTTTGGTAC
ATATGTGCGCTTGCAATAAACTTTAAAATAAGAGTGTTAAATTACATTTA
GAGTAATTTACCATCCAAAAAAAAAAAAAAAAA
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