CX300655

Overview
NameCX300655
Unique NameCX300655
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length558
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300655 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.093e-11
Identity = 44/122 (36.07%), Postives = 59/122 (48.36%), Query Frame = 2 
Query:    5 IEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPPP--AKGLHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNRVNEIWLL 364
            I+MTAPV + V P  GPF ES+ T+S Y+P   Q +PP      + ++        VR F GF S     E+   L AS+   +     EK         Y  A YNSP +  NR NE+WL+
Sbjct:   83 IKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTL-ASILREDGKVFDEK--------VYYTAGYNSPVKLLNRNNEVWLI 195
The following BLAST results are available for this feature:
BLAST of CX300655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HEBP2_HUMAN4.093e-1136.07Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
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Properties
Property NameValue
Genbank descriptionC07012G02SK SaltLeaf1 Citrus clementina cDNA clone C07012G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300655 ID=CX300655; Name=CX300655; organism=Citrus clementina; type=EST; length=558bp
AACAATAGAGATGACAGCTCCAGTAATCACTGAAGTTTTACCAAGTGATG
GACCCTTCTGTGAATCTTCATTCACCGTTAGCTTTTACGTCCCAAAGGTG
AACCAAGCCAACCCACCTCCAGCAAAAGGCCTCCATCTCCAACAATGGAA
ACCAACGTACGCGGCTGTGAGACAGTTCAGCGGGTTTGTATCAGACTCGA
ACATTGGTGAAGAAGCTGCTGCATTGCAAGCCAGCCTTGCAGGCACTGAA
TGGGCTGCAGCCATTGAGAAAAGACATGCAGAAGACTCCACTTCAAGTTA
CATTGTTGCACAGTATAACTCTCCCTTTGAATTTTACAACAGAGTGAATG
AGATATGGCTTTTGTTTGATTTGGAAGAAGGGTTTGCAATTTGAGTTTGC
AAATCTGGTTTGTAATGAAGAACTAAGTGGAGAGAAATCAAGTAGATGGA
TTTTGCTTTATACGGTTAATGTAATAATCGTTTTGCATTGTCATATGAAA
TGTTAGAGGGATCCATTATTGAATAAGTGTCGTCCGTTGGCATAAAAAAA
AAAAAAAA
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