CX305585

Overview
NameCX305585
Unique NameCX305585
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length363
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX305585 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 7.208e-30
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 2 
Query:    5 GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIHLERFLAGDYYHLYPKFLELVIPAIRERKMVYVEDIAEGLENASATLGGLFTGRNVGKQLVAVA 289
            GRIAVCGMISQYNLE  EGVHNL  +I KRI ++ F+  D+Y  YPKFLELV+P I+E K+ YVED+A+GLE A   L GLF G+NVGKQ+V +A
Sbjct:  247 GRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIA 341
[Close]
BLAST of CX305585 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.969e-29
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 2 
Query:    5 GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIHLERFLAGDYYHLYPKFLELVIPAIRERKMVYVEDIAEGLENASATLGGLFTGRNVGKQLVAVA 289
            GRIAVCGMISQYNLE  EGVHNL  +I KRI ++ F+  D+Y  Y KFLE V+P IRE K+ YVED+A+GLE A   L GLF G+NVGKQ+V VA
Sbjct:  249 GRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343
The following BLAST results are available for this feature:
BLAST of CX305585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
P2_ARATH7.208e-3064.21Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
P1_ARATH7.969e-2964.21Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionC18007E09Rv Drought1 Citrus clementina cDNA clone C18007E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305585 ID=CX305585; Name=CX305585; organism=Citrus clementina; type=EST; length=363bp
GCGGGGCCGCATTGCGGTATGCGGTATGATCTCGCAGTACAACCTGGAAA
AACCTGAAGGCGTACACAACTTAGAGCAACTGATTGGGAAACGGATTCAC
CTGGAACGATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATTCTT
GGAACTGGTCATTCCTGCAATCAGAGAAAGAAAGATGGTGTATGTGGAAG
ACATAGCCGAAGGACTCGAGAATGCTTCTGCAACCCTTGGCGGGCTCTTC
ACTGGCCGGAACGTCGGCAAGCAACTAGTTGCAGTTGCTTAATACAAAAG
CCGATATGTATGAACTGAGAATATGTGACTGAATCCATTGTCCGGTTAAA
AATGTTTACATGT
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