CX305591

Overview
NameCX305591
Unique NameCX305591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length420
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX305591 vs. ExPASy Swiss-Prot
Match: PRS1_SOLTU (Pathogenesis-related protein STH-21 OS=Solanum tuberosum GN=STH-21 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = -2 
Query:  234 YDVKIMDSGNGGSICKFVAEVHANGDKLVNEGHAKESEEKGLELFKLVEAYLLGNPNLYA 413
            YD+K    GNGG +CK +AE H  GD ++ +    E +++G+ELFK+VEAYLL NP++YA
Sbjct:   96 YDLKFEAHGNGGCVCKSIAEYHTKGDYVLKDEDHNEGKKQGMELFKIVEAYLLANPSVYA 155
[Close]
BLAST of CX305591 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = -2 
Query:  234 YDVKIMDSGNGGSICKFVAEVHANGDKLVNEGHAKESEEKGLELFKLVEAYLLGNPNLYA 413
            YD+K    GNGG +CK + E H  GD ++ +    E +++G+ELFK+VEAYLL NP++YA
Sbjct:   96 YDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPSVYA 155
The following BLAST results are available for this feature:
BLAST of CX305591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRS1_SOLTU2.312e-1250.00Pathogenesis-related protein STH-21 OS=Solanum tub... [more]
PRS2_SOLTU3.944e-1248.33Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
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Properties
Property NameValue
Genbank descriptionC18007F03Rv Drought1 Citrus clementina cDNA clone C18007F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305591 ID=CX305591; Name=CX305591; organism=Citrus clementina; type=EST; length=420bp
TTTTTTTTTTGTTTTTTTTTTTTTTTTTAGCATAACTGACCACACATGAT
CTATATTTATCTCACATATGTCCAGCAGATTGGACATTTATTTAACGAAC
ACACTAAGTACATACGCGTGTATTTACATTCAGCTTCAAAAGCTTAATTA
CGTACAATGGCACCAGCCTTATTTAGTTAGCTAGCTGGAAATTTCGCAAT
TGGCAAAGCCAATGCATATGGATGATTGATTTAAGCATAGAGATTAGGAT
TACCCAAGAGATAGGCTTCCACGAGCTTGAACAATTCCAATCCTTTTTCT
TCGGATTCCTTTGCGTGCCCTTCGTTGACCAGTTTATCGCCATTTGCATG
GACCTCCGCAACAAACTTGCAGATGCTTCCTCCATTGCCAGAATCCATGA
TCTTAACATCGTACACGCTT
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