CX305795

Overview
NameCX305795
Unique NameCX305795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length334
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:188..521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305795 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.486e-14
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 1
Query:   70 CPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLTGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFK 333
            CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFK 155          
BLAST of CX305795 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   70 CPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLTGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFK 333
            CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFK 162          
The following BLAST results are available for this feature:
BLAST of CX305795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC2.486e-1442.2221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.364e-1238.20Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionC18010D04Rv Drought1 Citrus clementina cDNA clone C18010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305795 ID=CX305795; Name=CX305795; organism=Citrus clementina; type=EST; length=334bp
TACATAGTCTCAGCCATCTGGGGAGCTGGCGGTGGTGGAGTTAGCCTACA
CGGTGGCAGAAACGGATATTGTCCGCTGGACGTTATCCAGTTACCTTCTG
ATATGCAAAATGGAATCGAATTAACACTGTCACCGTATAACAATTCTACA
ATTGTCCGAGAATCCACTGATCTCAACTTGAGATTCTCAGTGTTGCTAAC
TGGACGTGACTATTGTAACGAACAACCGTTATGGAAAGTTGATAATTATG
ACGCGGCATCAGGCAAATGGTTTATAACAACCGGGGGACTTGATGGTCAC
CCTGGAGCTGAAACTTTGCTAAATTGGTTTAAGC
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