CX306040

Overview
NameCX306040
Unique NameCX306040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length511
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig38 contig Ccv1_Contig38:440..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306040 vs. ExPASy Swiss-Prot
Match: HQGT_RAUSE (Hydroquinone glucosyltransferase OS=Rauvolfia serpentina GN=AS PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.312e-25
Identity = 55/80 (68.75%), Postives = 68/80 (85.00%), Query Frame = -1
Query:  272 KMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 511
            KMNAV+LTE +K+ALRPKA ENG++GR EIA  VK LMEGE+GK+ R+ MKDLKDAA+  LS++GSSTKAL++LA KW N
Sbjct:  386 KMNAVMLTEGLKVALRPKAGENGLIGRVEIANAVKGLMEGEEGKKFRSTMKDLKDAASRALSDDGSSTKALAELACKWEN 465          
BLAST of CX306040 vs. ExPASy Swiss-Prot
Match: HQGT_ARATH (Probable hydroquinone glucosyltransferase OS=Arabidopsis thaliana GN=At4g01070 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.972e-23
Identity = 50/78 (64.10%), Postives = 68/78 (87.18%), Query Frame = -1
Query:  278 KMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKW 511
            KMNAV+L+ED++ ALRP+A ++G+V R+E+A+VVK LMEGE+GK VRNKMK+LK+AA  VL ++G+STKALS +A KW
Sbjct:  390 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 467          
BLAST of CX306040 vs. ExPASy Swiss-Prot
Match: UFOG5_MANES (Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11
Identity = 32/84 (38.10%), Postives = 57/84 (67.86%), Query Frame = -1
Query:  269 KMNAVILTEDVKLALRPK---ANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 511
            +MNA +LTE++ +A+RPK   A E  +V R+EI ++++ +M  E+G E+R ++++LKD+    L+E GSS   +S L ++W  +
Sbjct:  395 RMNATLLTEELGVAVRPKNLPAKE--VVKREEIERMIRRIMVDEEGSEIRKRVRELKDSGEKALNEGGSSFNYMSALGNEWEKS 476          
The following BLAST results are available for this feature:
BLAST of CX306040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HQGT_RAUSE5.312e-2568.75Hydroquinone glucosyltransferase OS=Rauvolfia serp... [more]
HQGT_ARATH4.972e-2364.10Probable hydroquinone glucosyltransferase OS=Arabi... [more]
UFOG5_MANES9.725e-1138.10Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot... [more]
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Properties
Property NameValue
Genbank descriptionC18013C05Rv Drought1 Citrus clementina cDNA clone C18013C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306040 ID=CX306040; Name=CX306040; organism=Citrus clementina; type=EST; length=511bp
TTTTTTTTTTTTTTTTTTTTTTTTGGATTTCCACAATCCACATCAAGTGA
ATGCTGCATTATTATTTATTGAATTTATATATACATTGAAACGGCAATGT
ATCAGAGAAAGGAAACACACACGACCTACTGCTAGAGGCTAGAGCGTACA
ACCGGAAGGGAAATTAGATTAAACAAATTAAAAAAAAACTCTGAGATTAA
AAATTTTAAATTCTATGTAGAAAATTATAATATTGAATTTAAATCTGCAA
ACTGCATGGTTTCCCTTCGTTGTTGTTCCACTTGGAAGCCAACTGAGAGA
GGGCTTTGGTAGAAGATCCATTTTCACTCAGCACCGCGGCGGCCGCATCT
TTTAAGTCTTTCATTTTATTACGAACTTCTTTACCCTGTTCACCTTCCAT
TAGAGCTTTGACAACTTTAGCAATTTCATCTCTTCCCACGATCCCATTTT
CATTAGCTTTTGGTCTCAAAGCCAATTTCACGTCCTCGGTGAGTATCACG
GCATTCATCTT
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