CX306047

Overview
NameCX306047
Unique NameCX306047
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length549
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:527..1075. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306047 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.344e-27
Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = -2
Query:   75 LQYHIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSAIQWGKKLILSPYDNST-IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVL 545
            +QY+++S+I                 CP  V+Q  S +  G  +I S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G YK   CPSVC+SC  LCS +GR S +DG  RL L
Sbjct:   43 VQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG-YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX306047 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 3.207e-21
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = -2
Query:   57 CPLDVIQLPSAIQWGKKLILSPYD-NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEP 467
            CP  V+Q    +   + L   P +    +VR STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+    G YK+V CP+VC SC   C  VG +  + G RRL L   D+P
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CX306047 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16
Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = -2
Query:   66 LQYHIVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSAIQWGKKLILSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 545
            + Y +VSAIW                 CPL V+Q P     G+ +I S   N    IV ES DLN++F   ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K  LP +YK   CPS   + +  C++V  F  +  +RRL+L  D
Sbjct:   18 VDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
The following BLAST results are available for this feature:
BLAST of CX306047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.344e-2740.5121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.207e-2138.41Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA6.919e-1634.97Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC18013D01Rv Drought1 Citrus clementina cDNA clone C18013D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306047 ID=CX306047; Name=CX306047; organism=Citrus clementina; type=EST; length=549bp
ATTGATTACACAGACGTCGATCTTTCTCTAGCTGGAATTAACACAACAGG
AAAAGCCGGCTCATCATCACGAACCAGAACCAGACGTCGAACGCCATCCT
CAAACGAAAAGCGGCCAACGCTGCTGCAGAGTTTGACGCAAGACTCGCAA
ACAGATGGACAATGAACAATTTTGTATGCACCTGGTAGATTAGTTTTCTC
AAGCTTAAACCAATTTAGCAACGTTTCAGCTCCAGGGTGACCATCAAGTC
CCCCGGTTGTTATAAACCATCTGCCTGATGAAGCGTCATAGTTATCAACT
TTCCACAACGGTAGCTCGTTACATTGCTTACTTCCAGATAGTAACCCTAC
GAATCTCAAGTTGAGATCAGTGGATTCTCTGACAATTGTAGAATTGTCAT
ATGGTGACAGTATTAATTTCTTTCCCCATTGGATAGCAGAAGGTAATTGG
ATAACATCCAACGGACAGTATCCGTTTCTGCCTCCGTGTAGGCTAACTCC
ACCGCCGCCAGCTCCCCAGATGGCTGAGACTATATGGTACTGAAGAGTG
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