CX306096

Overview
NameCX306096
Unique NameCX306096
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:703..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX306096 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15
Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 3 
Query:   69 CPLDVIQLPSAIQWGKKLILSPYDNST-IIRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPG 356
            CP  V+Q  S +  G  +I S  D+   ++R STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG 163
[Close]
BLAST of CX306096 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.885e-12
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 3 
Query:   69 CPLDVIQLPSAIQWGKKLILSPYD-NSTIIRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEK 341
            CP  V+Q    +   + L   P +    ++R STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165
The following BLAST results are available for this feature:
BLAST of CX306096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC1.014e-1540.2121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.885e-1234.78Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionC18013H08Rv Drought1 Citrus clementina cDNA clone C18013H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306096 ID=CX306096; Name=CX306096; organism=Citrus clementina; type=EST; length=359bp
ATATAGTCTCAGCCATCTGGGGAGCTGGCGGCGGTGGAGTTAGCCTACAC
GGAGGCAGAAACGGATACTGTCCGTTGGATGTTATCCAATTACCTTCTGC
TATCCAATGGGGAAAGAAATTAATACTGTCACCATATGACAATTCTACAA
TTATCAGAGAATCCACTGATCTCAACTTGAGATTCGTAGGGTTACTATCT
GGAAGTAAGCAATGTAACGAGCTACCGTTGTGGAAAGTTGATAACTATGA
CGCTTCATCAGGCAGATGGTTTATAACAACCGGGGGACTTGATGGTCACC
CTGGAGCTGAAACGTTGCTAAATTGGTTTAAGCTTGAGAAAACTAATCTA
CCAGGTGCA
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