CX306099

Overview
NameCX306099
Unique NameCX306099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:703..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX306099 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.766e-16
Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = 3 
Query:   69 CPLDVIQLPSAIQWGKKLILSPYDNST-IVRESTDLNLRFVGLLSGSKRCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPG 356
            CP  V+Q  S +  G  +I S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG 163
[Close]
BLAST of CX306099 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.338e-12
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 3 
Query:   69 CPLDVIQLPSAIQWGKKLILSPYD-NSTIVRESTDLNLRFVGLLSGSKRCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEK 341
            CP  V+Q    +   + L   P +    +VR STDLN+ F   +    R     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165
The following BLAST results are available for this feature:
BLAST of CX306099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC7.766e-1641.2421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.338e-1236.96Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionC18013H11Rv Drought1 Citrus clementina cDNA clone C18013H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306099 ID=CX306099; Name=CX306099; organism=Citrus clementina; type=EST; length=359bp
ATATAGTCTCAGCCATCTGGGGAGCTGGCGGCGGTGGAGTTAGCCTACAC
GGAGGCAGAAACGGATACTGTCCGTTGGATGTTATCCAATTACCTTCTGC
TATCCAATGGGGAAAGAAATTAATACTGTCACCATATGACAATTCTACAA
TTGTCAGAGAATCCACTGATCTCAACTTGAGATTCGTAGGGTTACTATCT
GGAAGTAAGCGATGTAACGAGCTACCGTTGTGGAAAGTTGATAACTATGA
CGCTTCATCAGGCAGATGGTTTATAACAACCGGGGGACTTGATGGTCACC
CTGGAGCTGAAACGTTGCTAAATTGGTTTAAGCTTGAGAAAACTAATCTA
CCAGGTGCA
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