CX306105

Overview
NameCX306105
Unique NameCX306105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length498
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:6..503. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306105 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17
Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 3
Query:   57 ATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLGVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAET 497
            AT +  L+ A  S S      ++   P+LD  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  T
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNT 149          
BLAST of CX306105 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.741e-15
Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 3
Query:   48 ISLATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLGVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAET 497
            +SL+      +LA A+N LL     S P P+LD+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPET 156          
BLAST of CX306105 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12
Identity = 45/126 (35.71%), Postives = 64/126 (50.79%), Query Frame = 3
Query:  129 PEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLGVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAET 497
            P+P++D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFES 121          
The following BLAST results are available for this feature:
BLAST of CX306105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC3.825e-1732.2121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.741e-1532.68Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.273e-1235.71Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC18014A09Rv Drought1 Citrus clementina cDNA clone C18014A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306105 ID=CX306105; Name=CX306105; organism=Citrus clementina; type=EST; length=498bp
GCGGGGGCATCAAACAGATATATAGCTTTGAAAACAACAAAATGAAGATT
TCATTAGCAACAACACTCTCTTTCCTTATCCTTGCCTTGGCCTCAAACTC
TTTGTTGGTCTTGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCC
ACGGAAACAAGGTCGAATCCACCCTTAAGTACTACATAGTCTCAGCCATC
TGGGGAGCTGGCGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATA
TTGTCCGCTGGGCGTTATCCAGTTACCTTCTGATATGCAAAATGGAATCG
AATTAACACTGTCACCGTATAACAATTCTACAATTGTCCGAGAATCCACT
GATCTCAACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAA
CGAACAACCGTTGTGGAAAGTTGATAATTATGACGCGGCATCAGGCAAAT
GGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTT
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