CX306117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB21B_ARATH (ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.522e-39 Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVKDPK+LLLDEATSALDAESERVVQDALDRVM NRTTVVVAHRLSTIKNAD+IAVVKNGVIVEKGKHE LINI DG YASL+ LH SAS Sbjct: 1200 RAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGVYASLVQLHLSAS 1291 HSP 2 Score: 129.413 bits (324), Expect = 5.537e-30 Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+KDP+ILLLDEATSALDAESER+VQ+ALDR+M NRTTVVVAHRLST++NADMIAV+ G IVEKG H L+ P+G Y+ LI L Sbjct: 554 RAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHSELLRDPEGAYSQLIRL 640
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB4B_ARATH (ABC transporter B family member 4 OS=Arabidopsis thaliana GN=ABCB4 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.231e-37 Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVKDPK+LLLDEATSALDAESERVVQDALDRVM NRTT+VVAHRLSTIKNAD+IAVVKNGVIVEKGKH+ LINI DG YASL+ LH +A+ Sbjct: 1194 RAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKDGVYASLVQLHLTAA 1285 HSP 2 Score: 129.413 bits (324), Expect = 5.537e-30 Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+KDP+ILLLDEATSALDAESERVVQ+ALDR+M NRTTVVVAHRLST++NADMIAV+ G IVEKG H L+ P+G Y+ LI L Sbjct: 535 RAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHTELLKDPEGAYSQLIRL 621
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB3B_ARATH (ABC transporter B family member 3 OS=Arabidopsis thaliana GN=ABCB3 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.107e-37 Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+PKILLLDEATSALDAESERVVQDALDRVM NRTTVVVAHRLSTIKNAD+IAVVKNGVIVEKG HE LINI G YASL+ LH SAS Sbjct: 1137 RAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGTHETLINIEGGVYASLVQLHISAS 1228 HSP 2 Score: 124.405 bits (311), Expect = 1.781e-28 Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+KDP+ILLLDEATSALDAESERVVQ+ALDRVM +RTTV+VAHRLST++NADMIAV+ G IVE+G H L+ +G YA LI L Sbjct: 499 RAILKDPRILLLDEATSALDAESERVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGSHSELLKDHEGAYAQLIRL 585
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB5B_ARATH (ABC transporter B family member 5 OS=Arabidopsis thaliana GN=ABCB5 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.170e-36 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+PKILLLDEATSALDAESERVVQDALDRVM NRTT+VVAHRLSTIKNAD+IAVVKNGVI EKG HE LINI G YASL+ LH +AS Sbjct: 1138 RAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLINIEGGVYASLVQLHINAS 1229 HSP 2 Score: 122.094 bits (305), Expect = 8.839e-28 Identity = 60/87 (68.97%), Postives = 74/87 (85.06%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+KDP+ILLLDEATSALDAESERVVQ+ALDR+M NRTTV+VAHRLST++NAD+IAV+ G IVE+G H L+ +G Y+ L+ L Sbjct: 504 RAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTVRNADIIAVIHRGKIVEEGSHSELLKDHEGAYSQLLRL 590
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB11B_ARATH (ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.965e-35 Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+PKILLLDEATSALDAESERVVQDALDRVM NRTT+VVAHRLSTIKNAD+IAVVKNGVI EKG HE LI I G YASL+ LH +AS Sbjct: 1186 RAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLIKIEGGVYASLVQLHMTAS 1277 HSP 2 Score: 125.561 bits (314), Expect = 7.995e-29 Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+KDP+ILLLDEATSALDAESERVVQ+ALDRVM NRTTV+VAHRLST++NADMIAV+ G +VEKG H L+ +G Y+ LI L Sbjct: 532 RAILKDPRILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGSHSELLKDSEGAYSQLIRL 618
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB12B_ARATH (ABC transporter B family member 12 OS=Arabidopsis thaliana GN=ABCB12 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 4.839e-34 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+PKILLLDEATSALDAESER+VQDALDRV+ NRTTVVVAHRLSTIKNAD+IA+VKNGVI E G HE LI I G YASL+ LH +AS Sbjct: 1181 RAIVKEPKILLLDEATSALDAESERLVQDALDRVIVNRTTVVVAHRLSTIKNADVIAIVKNGVIAENGTHETLIKIDGGVYASLVQLHMTAS 1272 HSP 2 Score: 121.324 bits (303), Expect = 1.508e-27 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = -1 Query: 48 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLI 302 RAI+KDP++LLLDEATSALD ESERVVQ+ALDRVM NRTTVVVAHRLST++NADMIAV+ +G +VEKG H L+ G Y+ LI Sbjct: 519 RAILKDPRVLLLDEATSALDTESERVVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHSGKMVEKGSHSELLKDSVGAYSQLI 603
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB7B_ARATH (ABC transporter B family member 7 OS=Arabidopsis thaliana GN=ABCB7 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.557e-32 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAI+KDPKILLLDEATSALDAESERVVQDALD+VM NRTTVVVAH L+TIK+ADMIAVVKNGVI E G+HE L+ I G YASL+A + SA+ Sbjct: 1157 RAILKDPKILLLDEATSALDAESERVVQDALDQVMVNRTTVVVAHLLTTIKDADMIAVVKNGVIAESGRHETLMEISGGAYASLVAFNMSAN 1248 HSP 2 Score: 120.553 bits (301), Expect = 2.572e-27 Identity = 59/91 (64.84%), Postives = 76/91 (83.52%), Query Frame = -1 Query: 30 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSA 302 RAI+K+PKILLLDEATSALDAESER+VQDAL ++M +RTTVVVAHRL+TI+ ADMIAVV+ G ++EKG H+ +I P+G Y+ L+ L + Sbjct: 508 RAILKNPKILLLDEATSALDAESERIVQDALVKLMLSRTTVVVAHRLTTIRTADMIAVVQQGKVIEKGTHDEMIKDPEGTYSQLVRLQEGS 598
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB2B_ARATH (ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.239e-30 Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+P ILLLDEATSALDAESE+ VQ+ALDRVM RTTVVVAHRLST++NAD+IAVV G IVE G HENLI+ PDG Y+SL+ L +AS Sbjct: 512 RAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLISNPDGAYSSLLRLQETAS 603 HSP 2 Score: 114.005 bits (284), Expect = 2.407e-25 Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+K+P ILLLDEATSALD ESERVVQ ALDR+M NRTTVVVAHRLSTIKNAD I+V+ G IVE+G H L+ G Y LI+L Sbjct: 1141 RAILKNPAILLLDEATSALDVESERVVQQALDRLMANRTTVVVAHRLSTIKNADTISVLHGGKIVEQGSHRKLVLNKSGPYFKLISL 1227
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB9B_ARATH (ABC transporter B family member 9 OS=Arabidopsis thaliana GN=ABCB9 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.233e-29 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = -1 Query: 84 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENL 302 RAI+KDPKILLLDEATSALDAESERVVQDALDRVM NRTTVVVAHRL+TIKNAD+IAVVKNGVI EKG+HE L Sbjct: 1187 RAILKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETL 1259 HSP 2 Score: 120.939 bits (302), Expect = 1.969e-27 Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = -1 Query: 30 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSA 302 RAI+K+PKILLLDEATSALDAESER+VQDAL +M NRTTVVVAHRL+TI+ AD+IAVV G IVEKG H+ +I P+G Y+ L+ L + Sbjct: 506 RAILKNPKILLLDEATSALDAESERIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQDPEGAYSQLVRLQEGS 596
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB10B_ARATH (ABC transporter B family member 10 OS=Arabidopsis thaliana GN=ABCB10 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.611e-29 Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RAIVK+P ILLLDEATSALDAESE++VQ+ALDRVM RTTVVVAHRLST++NAD+IAVV G I+E G H+ LI+ PDG Y+SL+ + +AS Sbjct: 512 RAIVKNPSILLLDEATSALDAESEKIVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVGGGKIIESGSHDELISNPDGAYSSLLRIQEAAS 603 HSP 2 Score: 117.857 bits (294), Expect = 1.667e-26 Identity = 58/87 (66.67%), Postives = 76/87 (87.36%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RA++K+P+ILLLDEATSALD ESERVVQ ALDR+M++RTTVVVAHRLSTIKN+DMI+V+++G I+E+G H L+ +G Y+ LI+L Sbjct: 1133 RAVLKNPEILLLDEATSALDVESERVVQQALDRLMRDRTTVVVAHRLSTIKNSDMISVIQDGKIIEQGSHNILVENKNGPYSKLISL 1219 The following BLAST results are available for this feature:
BLAST of CX306117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 313
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306117 ID=CX306117; Name=CX306117; organism=Citrus clementina; type=EST; length=302bpback to top |