CX306121

Overview
NameCX306121
Unique NameCX306121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length355
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1030 contig Ccv1_Contig1030:186..540. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306121 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.512e-16
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = -3
Query:    9 CPLDVIQLPSDTQNGIKLTLSPY-SNSTIVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIG 287
            CP  V+Q  SD  NG  +  S   S   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG 160          
BLAST of CX306121 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 8.097e-13
Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -3
Query:   15 CPLDVIQLPSDTQNGIKLTLSPYS-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEK 287
            CP  V+Q   +  +   L   P +    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165          
BLAST of CX306121 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.898e-11
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = -3
Query:    9 IVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSDTQNGIKLTLSPYSN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIG 353
            +VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G
Sbjct:   22 VVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG 132          
The following BLAST results are available for this feature:
BLAST of CX306121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC3.512e-1644.2121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.097e-1336.96Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA9.898e-1136.44Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC18014C03Rv Drought1 Citrus clementina cDNA clone C18014C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306121 ID=CX306121; Name=CX306121; organism=Citrus clementina; type=EST; length=355bp
GGAAAATTTCCAATTTTCTCAAGCTTAAACCAATTTAGCAAAGTTTCAGC
TCCAGGGTGACCATCAAGTCCCCCGGTTGTTATAAACCATTTGCCTGATG
CCGCGTCATAATTATCAACTTTCCACAACGGTTGTTCGTTACAATAGTCA
CGTCCAGATAGCAACACTGAGAATCTCAAGTTGAGATCAGTGGATTCTCG
GACAATTGTAGAATTGCTATACGGTGACAGTGTTAATTTGATTCCATTTT
GCGTATCAGAAGGTAATTGGATAACGTCCAGCGGACAATATCCGTTTCTG
CCACCGTGTAGGCTAACTCCACCACCGCCAGCTCCCCAGATGGCTGAGAC
TATGT
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