CX306154

Overview
NameCX306154
Unique NameCX306154
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length364
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX306154 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    9 SIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPYVAAAAQPK 362
            ++ N F ++G+EQE+      E LK L+ ELK K+FF G+K G AD+A   +   +GVFEE  G  L++ E+FP  S W  E+     + ES PP ++L+  FRA  +  VA+ + PK
Sbjct:  106 AVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQAVVASRSAPK 223          
BLAST of CX306154 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.570e-19
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    9 SIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPYVAAAAQPK 362
            ++ N F ++G+EQE+      E LK L+ ELK K+FF G+K G AD+A   +   +GVFEE  GV L+  E+FP  S W  E+     +KES P  ++L+  FRA  +  VA+ + PK
Sbjct:  106 AVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISAPK 223          
BLAST of CX306154 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.476e-19
Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 3
Query:    9 SIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPYVAAAAQPK 362
            ++   F+++G+EQE+      E LK L+ ELK K+FF G+K G AD+A   +A  +GVFEE  GV L+  E+FP    W  E+     IKES PP ++L+  +R+  +   A+A+ PK
Sbjct:  106 AVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSRCQAAAASASAPK 223          
BLAST of CX306154 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 3
Query:   18 NAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPYVAA 347
            + F    KE+E+ +    E L+FLE ELK K+FFGGE+ GL D+A  ++A  I +F+E+ G++L   E+FP+L  W QEF   P + E  PP + L   F+A  E   A+
Sbjct:  115 SVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSAS 224          
BLAST of CX306154 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 3
Query:    3 GVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPYVAA 347
            G ++W +F  +G+EQE+A   A E LK L+ E K K+ F G+K G AD+     A  +G+ EEV G+ L   E+FP   AW  E+      +E +P  ++L+ ++RA  +P  A+
Sbjct:  104 GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDELLIRYRAYIQPVDAS 216          
The following BLAST results are available for this feature:
BLAST of CX306154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GSTX2_TOBAC1.967e-1939.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.570e-1940.68Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC7.476e-1939.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN2.175e-1840.91Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_SOLTU3.473e-1636.52Probable glutathione S-transferase OS=Solanum tube... [more]
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Properties
Property NameValue
Genbank descriptionC18014F08Rv Drought1 Citrus clementina cDNA clone C18014F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306154 ID=CX306154; Name=CX306154; organism=Citrus clementina; type=EST; length=364bp
GCGGGGTATCAATATGGAATGCTTTCATTAAGCAAGGGAAAGAACAAGAG
GAAGCTATTGGCCTAGCAATTGAGACTCTGAAATTCTTAGAAGAAGAGCT
GAAGGGAAAGAGATTTTTTGGTGGAGAGAAGATTGGATTGGCAGATCTTG
CATTGGGCTGGCTTGCTAATTTGATCGGCGTATTTGAAGAGGTAATTGGT
GTGAAACTGATAGAAAAGGAGCGGTTTCCACTGCTGTCAGCTTGGATGCA
AGAGTTTGCTGAGGCCCCTGTAATCAAAGAAAGCTGGCCACCTCATGAAA
AACTAGTCACCAAATTTCGTGCCATCCGAGAGCCTTATGTTGCAGCTGCT
GCCCAGCCTAAATG
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