CX306349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.934e-35 Identity = 74/107 (69.16%), Postives = 83/107 (77.57%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 RIDWKETP+AHVFKAD+PGL+ +G ILQISGE +KEQEEK D+WHRVERSSGKFLRRFRLPDNAK EQ+KASMENGVLTVT K+I+ISG Sbjct: 55 RIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.599e-34 Identity = 73/106 (68.87%), Postives = 84/106 (79.25%), Query Frame = -3 Query: 233 IDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 550 IDWKETPQAHVFKADLPGL+ EG++LQISGE +KE+EEKNDKWHRVERSSGKFLRRFRLP+NAKV++VKA+M NGV+TVT KAI+ISG Sbjct: 52 IDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.434e-34 Identity = 71/107 (66.36%), Postives = 82/107 (76.64%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 RIDWKETP+AHVFKAD+PGL+ +G +LQISGE SKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+++G Sbjct: 55 RIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.791e-34 Identity = 72/107 (67.29%), Postives = 82/107 (76.64%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 RIDWKETP+ HVFKAD+PGL+ +G ILQISGE S+EQEEK+DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+ISG Sbjct: 53 RIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.877e-34 Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 R+DWKETP+AHVFKAD+PGL+ + ++LQISGE + E+E+KND WHRVERSSGKF+RRFRLP+NAKVEQVKASMENGVLTVT KAIEISG Sbjct: 55 RVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.877e-34 Identity = 71/107 (66.36%), Postives = 84/107 (78.50%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 R+DWKETP++HVFKADLPG++ EG +L ISG+ SKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKASMENGVLTVT KAIEISG Sbjct: 43 RVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.290e-33 Identity = 71/107 (66.36%), Postives = 84/107 (78.50%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 R+DWKETP+AHVFKADLPGL+ + R+LQISGE S E+E+KND+WHRVERSSGKFLRRFRLP+NAK+++VKASMENGVLTVT K+IEISG Sbjct: 52 RVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.685e-33 Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 ++DW+ETP+AHVFKADLPGLR +G ILQISGE S E EEKNDKWHRVERSSGKF RRFRLP+NAK+E++KASMENGVL+VT K+I+ISG Sbjct: 51 KVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.685e-33 Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 RIDWKETP+AHVFKAD+PGL+ +G +LQISGE KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+I+G Sbjct: 48 RIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
BLAST of CX306349 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.200e-33 Identity = 72/107 (67.29%), Postives = 83/107 (77.57%), Query Frame = -3 Query: 233 RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGEGSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 553 RIDWKETP+AHVFKADLPGL+ E R+LQISGE + E+E+KND WHRVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT K+IEISG Sbjct: 48 RIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154 The following BLAST results are available for this feature:
BLAST of CX306349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306349 ID=CX306349; Name=CX306349; organism=Citrus clementina; type=EST; length=555bpback to top |