CX307751

Overview
NameCX307751
Unique NameCX307751
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length193
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX307751 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.518e-14
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 1 
Query:    1 EKCGTTRDGKGQLTSTAVIVASLYALVKEFVAAIGDEKKALFSEIERGVVVLEGSTARHGKIYL 192
            EK GT+RD KGQLTS A IV  L  LVKEFVAA  +EKKA+F+ IE  V  LEGS +R+GKIYL
Sbjct:  253 EKSGTSRDAKGQLTSEAGIVEDLDELVKEFVAANDEEKKAVFARIEEEVKKLEGSASRYGKIYL 316
[Close]
BLAST of CX307751 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.518e-14
Identity = 42/64 (65.62%), Postives = 47/64 (73.44%), Query Frame = 1 
Query:    1 EKCGTTRDGKGQLTSTAVIVASLYALVKEFVAAIGDEKKALFSEIERGVVVLEGSTARHGKIYL 192
            EK GT+RD KGQLTS A IV SL ALVKE VAA  DEKKA+ S IE     L+GST R+GK+YL
Sbjct:  247 EKSGTSRDSKGQLTSKAGIVESLDALVKELVAASEDEKKAVLSRIEEEASTLKGSTTRYGKLYL 310
The following BLAST results are available for this feature:
BLAST of CX307751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PDIA6_MEDSA2.518e-1465.63Probable protein disulfide-isomerase A6 OS=Medicag... [more]
PDIA6_ARATH2.518e-1465.63Probable protein disulfide-isomerase A6 OS=Arabido... [more]
back to top
Properties
Property NameValue
Genbank descriptionC20001D06SK OF2 Citrus clementina cDNA clone C20001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307751 ID=CX307751; Name=CX307751; organism=Citrus clementina; type=EST; length=193bp
GAAAAATGTGGCACCACTCGTGATGGAAAAGGACAACTTACTTCAACGGC
GGTTATAGTTGCCAGCTTATATGCCTTGGTGAAGGAATTCGTTGCTGCTA
TCGGTGATGAAAAGAAGGCACTCTTCTCAGAGATTGAACGGGGAGTTGTG
GTGCTTGAGGGTTCCACTGCCAGGCATGGGAAGATTTACTTGA
back to top