CX307755

Overview
NameCX307755
Unique NameCX307755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length386
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307755 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.667e-26
Identity = 55/71 (77.46%), Postives = 63/71 (88.73%), Query Frame = 1 
Query:    1 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNV 213
            G I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E    A+FTVKEDNNLSL+EYEL+NV
Sbjct:   79 GCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149
The following BLAST results are available for this feature:
BLAST of CX307755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH1.667e-2677.46Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC20001D12SK OF2 Citrus clementina cDNA clone C20001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307755 ID=CX307755; Name=CX307755; organism=Citrus clementina; type=EST; length=386bp
GGAATGATTATCTTTACTGCTAGAAATGATCAAGTGGACCTGATGAAAGA
GGGTACTACTGTGATTCTGCGCAATGCAAAAATTGACATGTTTAAAGGAT
CAATGAGACTTGCTGTGGACAAGTGGGGCCGTGTTGAAGTTGCAGAGCCT
GCCAATTTCACCGTGAAGGAAGATAACAACCTCTCTCTGATTGAATATGA
GCTTGTGAATGTTGTAGAAGAGTGAATTTCTGGACGGTGTTCACTTACTC
ACTGCAATGTGACCCAAGAATAAAAAGAAATCCAGCATATCATAGTACTG
TCGTTTATGCGGCATCTCCTGTCCAAAACTGTGGTGCCTTTAGGAAGAAG
AAATCTGGAAGCTATTACTACCCAAGATGCTTTCTA
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