CX307763
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.945e-47 Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ K +IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G Sbjct: 96 HNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.945e-47 Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ K +IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G Sbjct: 96 HNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.186e-46 Identity = 84/122 (68.85%), Postives = 103/122 (84.43%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+R++EM V+ IP+E K F VV GDVV+LPAFGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAGKY+IV N++EA+YV DYI+ G Sbjct: 96 HNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPAFGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAQYVADYIING 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.186e-46 Identity = 88/122 (72.13%), Postives = 98/122 (80.33%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+RL EM V I V G K F VV GDVV+LPAFGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY HEETVAT+SFAG Y++V N+KEA+YVCDYIL G Sbjct: 96 HNPSVNQRLLEMNVGFIEVINGSKDFSVVEAGDVVILPAFGASVTEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYKHEETVATSSFAGTYLVVLNLKEAQYVCDYILNG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_MICAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=ispH PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.218e-45 Identity = 87/126 (69.05%), Postives = 102/126 (80.95%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYIL-GGELN 376 HNP+VN+RL MAV IPVE G+K F VV GDVV+LPAFGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+IV N+ +A YV +YIL GG+ N Sbjct: 96 HNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLDQANYVANYILHGGDKN 221
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.078e-45 Identity = 81/122 (66.39%), Postives = 103/122 (84.43%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+ L EM+V+ IP E G+K F VV++GDVV+LPAFGA+V+EM L+ K IVDTTCPWVSKVW +VEKHK+G +TSIIHGKY+HEETVAT+SFA Y++V N+++A+YVCDYIL G Sbjct: 96 HNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.078e-45 Identity = 81/122 (66.39%), Postives = 103/122 (84.43%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+ L EM+V+ IP E G+K F VV++GDVV+LPAFGA+V+EM L+ K IVDTTCPWVSKVW +VEKHK+G +TSIIHGKY+HEETVAT+SFA Y++V N+++A+YVCDYIL G Sbjct: 96 HNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.045e-45 Identity = 83/122 (68.03%), Postives = 101/122 (82.79%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+RL +M V+ IPV E +K F VV + DVV+LPAFGA+V EM LN+K IVDTTCPWV+KVW SVEKHKK +YTSIIHGKY HEETVAT+SFAG Y++V NM++A+YVC+YIL G Sbjct: 96 HNPSVNQRLRDMKVEFIPVIEDQKDFSVVERDDVVILPAFGASVTEMQLLNDKGCTIVDTTCPWVAKVWNSVEKHKKRNYTSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYVCNYILNG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.895e-45 Identity = 84/122 (68.85%), Postives = 99/122 (81.15%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+RL +MAV+ IPV G K F V GDVV+LPAFGA+V+EM LN + IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SFAG Y+IV N++EA YVCDYIL G Sbjct: 96 HNPSVNERLRQMAVEFIPVVNGVKDFSGVRPGDVVILPAFGASVQEMQLLNERGCTIVDTTCPWVSKVWHSVEKHKKVSFTSIIHGKYNHEETIATSSFAGTYLIVLNLEEARYVCDYILHG 217
BLAST of CX307763 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.347e-44 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 2 Query: 2 HNPTVNKRLEEMAVQNIPVEE-GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGG 367 HNP+VN+ L EM V+ IPV+E G+K F VV DVV+LPAFGA+V+EM LN+K +I+DTTCPWVSKVW SVEKHKKG YTSIIHGKY HEET+AT+S+A Y+IV ++KEAEYVC+YIL G Sbjct: 96 HNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILPAFGASVQEMQLLNDKGCKIMDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYQHEETIATSSYAATYLIVLDLKEAEYVCNYILNG 218 The following BLAST results are available for this feature:
BLAST of CX307763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307763 ID=CX307763; Name=CX307763; organism=Citrus clementina; type=EST; length=393bpback to top |