CX307778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_ARATH (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Arabidopsis thaliana GN=At2g45300 PE=2 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 1.718e-39 Identity = 79/119 (66.39%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GLKQLGADV+C LGTNCPPVR+N QY G+VEIEI+DKLISVPYVEMTLKLMERFGV VEHSDSWDRFF++GGQKYKSPGNA+ Sbjct: 206 ERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTALLMSAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVEHSDSWDRFFVKGGQKYKSPGNAY 324
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_BRANA (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.827e-39 Identity = 79/119 (66.39%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GLKQLGADV+C LGTNCPPVR+N QY G+VEIEIIDKLISVPYVEMTLKLMERFGV EHSDSWDRFF++GGQKYKSPGNA+ Sbjct: 202 ERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSAEHSDSWDRFFVKGGQKYKSPGNAY 320
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_SOLLC (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.582e-37 Identity = 78/119 (65.55%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GLKQLGA+VDC LGTNCPPVRI QY G+VEIEIIDKLISVPYVEMTLKLMERFGVFVEHS WDRF ++GGQKYKSPG AF Sbjct: 206 ERPIGDLVDGLKQLGAEVDCSLGTNCPPVRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSSGWDRFLVKGGQKYKSPGKAF 324
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_PETHY (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Petunia hybrida PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.961e-36 Identity = 76/119 (63.87%), Postives = 81/119 (68.07%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPI DLV GLKQLGA+VDC LGT CPPVRI QY G+VEIEIIDKLISVPYVEMTLKLMERFG+ VEHS SWDRFF++GGQKYKSPG AF Sbjct: 202 ERPISDLVDGLKQLGAEVDCFLGTKCPPVRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGISVEHSSSWDRFFVRGGQKYKSPGKAF 320
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA1_TOBAC (3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplastic OS=Nicotiana tabacum GN=EPSPS-1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.756e-36 Identity = 75/119 (63.03%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GLKQLGA+VDC LGTNCPPVRI QY G+VEIEIIDKLISVPYVEMTLKLMERFGV VEH+ SWD+F ++GGQKYKSPG A+ Sbjct: 204 ERPIGDLVDGLKQLGAEVDCFLGTNCPPVRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHTSSWDKFLVRGGQKYKSPGKAY 322
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA2_TOBAC (3-phosphoshikimate 1-carboxyvinyltransferase 2 (Fragment) OS=Nicotiana tabacum GN=EPSPS-2 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.664e-34 Identity = 74/119 (62.18%), Postives = 80/119 (67.23%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GLKQLGA+VDC LGT CPPVRI QY G+VEIEIIDKLISV YVEMTLKLMERFG+ VEHS SWDRF ++GGQKYKSPG A+ Sbjct: 24 ERPIGDLVDGLKQLGAEVDCFLGTKCPPVRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVLYVEMTLKLMERFGISVEHSSSWDRFVVRGGQKYKSPGKAY 142
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_BURS3 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia sp. (strain 383) GN=aroA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.044e-16 Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQY---XXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPG 349 ERPIGDLV GL+Q+GA +D L PP+RI Q+ G + +E+ +LIS PY+++T++LMERFGV VE D W RF + G +Y+SPG Sbjct: 120 ERPIGDLVDGLRQIGAQIDYELNEGYPPLRIKPANISVDAPIRVRGDVSSQFLTALLMTLPLVKAKDGKIVVEVDGELISKPYIDITIRLMERFGVTVER-DGWQRFVVPAGVRYRSPG 237
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_RALEJ (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia eutropha (strain JMP134) GN=aroA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.766e-16 Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXX---GNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAF 358 ERPIGDLV GL+Q+GAD+ + PP+ I Q+ G +EIE++ +LIS PY+E+TL L+ RFG+ VE W+RF + G Y+SPG + Sbjct: 120 ERPIGDLVDGLRQVGADIGYLANEGFPPLHIRPAQIRIDAPIRVRGDVSSQFLTALLMTLPMAQAANGKIEIEVVGELISKPYIEITLNLLARFGINVER-QGWERFIVPAGAVYRSPGEIY 240
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_BURVG (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=aroA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 45/119 (37.82%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXX---GNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPG 349 ERPIGDLV GL+Q+GA +D PP+RI Q+ G + +E+ +LIS PY+++T++LMERFGV VE D W RF + G +Y+SPG Sbjct: 120 ERPIGDLVDGLRQIGAQIDYEQNEGFPPLRIKPAAITVDAPIRVRGDVSSQFLTALLMTLPLVKAKDGKIVVEVDGELISKPYIDITIRLMERFGVTVER-DGWQRFVVPAGVRYRSPG 237
BLAST of CX307778 vs. ExPASy Swiss-Prot
Match: AROA_BURCC (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=aroA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 2 ERPIGDLVTGLKQLGADVDCILGTNCPPVRINXXXXXXXXXXXXXXXXXXQY---XXXXXXXXXXXXGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPG 349 ERPIGDLV GL+Q+GA +D L PP+RI Q+ G +E+ +LIS PY+++T++LM RFGV VE D W RF + G +YKSPG Sbjct: 120 ERPIGDLVDGLRQIGAQIDYELNEGYPPLRIKPATISVDAPIRVRGDVSSQFLTALLMTLPLVKAKDGRTVVEVDGELISKPYIDITIRLMARFGVTVER-DGWQRFVVPAGVRYKSPG 237 The following BLAST results are available for this feature:
BLAST of CX307778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307778 ID=CX307778; Name=CX307778; organism=Citrus clementina; type=EST; length=358bpback to top |