CX307782

Overview
NameCX307782
Unique NameCX307782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length371
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 1.020e-60
Identity = 104/122 (85.25%), Postives = 112/122 (91.80%), Query Frame = 1
Query:    4 NMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            NMSL WNE+GWD+ SNLLYVDQP GTGFSYT+DK DIRH+E GVSNDLYDFLQAFF EHPKLA+NDFYITGESYAGHYIPAFA+RVH GNKA EG+HINLKGFAIGNGLTDP +QY AYPDY
Sbjct:  157 NMSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASRVHKGNKANEGVHINLKGFAIGNGLTDPALQYPAYPDY 278          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 1.166e-56
Identity = 99/123 (80.49%), Postives = 109/123 (88.62%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            DNMSLVWN+ GWD+ SNL+YVDQPTGTGFSY+S+ RD RH+E GVSNDLY FLQAFF EHP  A+NDFYITGESYAGHYIPAFA+RV+ GNK  EGIHINLKGFAIGNGLTDP +QYKAY DY
Sbjct:   75 DNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDLYAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNSEGIHINLKGFAIGNGLTDPAIQYKAYTDY 197          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 4.433e-56
Identity = 95/123 (77.24%), Postives = 109/123 (88.62%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            +NMSLVWN+ GWDK SN+++VDQPTGTGFSY+SD RD RH+E GVSNDLYDFLQ FF++HP+  +NDF+ITGESYAGHYIPAFA+RVH GNK  EG HINLKGFAIGNGLTDP +QYKAY DY
Sbjct:  150 NNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKGFAIGNGLTDPAIQYKAYTDY 272          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 5.789e-56
Identity = 97/123 (78.86%), Postives = 109/123 (88.62%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            +N SL WNE GWDKASNL+YVDQP GTGFSYTSD+ D+RH+E+GVSNDLYDFLQAFF+EHP+  +NDFYITGESYAGHYIPA A+RVH GNK KEG HINLKGFAIGNGLT+P +QY AY DY
Sbjct:  158 NNSSLSWNEFGWDKASNLIYVDQPVGTGFSYTSDQSDLRHDEDGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHRGNKNKEGTHINLKGFAIGNGLTNPEIQYGAYADY 280          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 5.789e-56
Identity = 95/123 (77.24%), Postives = 109/123 (88.62%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            +NMSL WN+ GWD  SN+++VDQPTGTGFSY+SD RD RH+E GVSNDLY FLQ FF++HP+ A+NDF+ITGESYAGHYIPAFA+RVH GNKA EGIHINLKGFAIGNGLTDP +QYKAY DY
Sbjct:  143 NNMSLAWNKFGWDTISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYSFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGNKANEGIHINLKGFAIGNGLTDPAIQYKAYTDY 265          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.432e-54
Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            +NMSLVWN+ GWDK SN+++VD  TGTGFSY+SD RD RH+E GVSNDLYDFLQ FF++HP+  +NDF+ITGESYAGHYIPAFA+RVH GNK  EG HINLKGFAIGNGLTDP +QYKAY DY
Sbjct:  143 NNMSLVWNKFGWDKISNIIFVDPATGTGFSYSSDDRDTRHDEAGVSNDLYDFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKGFAIGNGLTDPAIQYKAYTDY 265          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.207e-53
Identity = 93/122 (76.23%), Postives = 109/122 (89.34%), Query Frame = 1
Query:    4 NMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            ++SL WN+ GWDK SN++YVDQP GTGFSYTSD+ DIR++E+GVSNDLYDFLQAFF+EHPK  +NDF+ITGESYAGHYIPA A+RVH+GNK KEGI INLKGFAIGNGLT+P +QY AY DY
Sbjct:  156 DLSLYWNDFGWDKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVSNDLYDFLQAFFKEHPKFVKNDFFITGESYAGHYIPALASRVHSGNKKKEGIPINLKGFAIGNGLTNPEIQYGAYGDY 277          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: SCP54_ARATH (Putative serine carboxypeptidase-like 54 OS=Arabidopsis thaliana GN=SCPL54 PE=5 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.135e-35
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 1
Query:   40 KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLK 306
            K SNL+YVDQP  TGFSY +D  D+RH+E+ VSNDLYDFLQAFF+EHP LA++DFYITGESYAGHYIPA A+RVHNGN+ KEGI INLK
Sbjct:   86 KISNLIYVDQPIRTGFSYANDSTDLRHDEDSVSNDLYDFLQAFFKEHPNLAKDDFYITGESYAGHYIPALASRVHNGNEKKEGIVINLK 174          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.660e-26
Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 1
Query:    1 DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAY 360
            DN +LV  E  W+    +LY+D P GTGFS+T  +    +NE+ ++ +LY FLQ F++ +P+   N+ YITGESYAG YIPAF+  +   N+     +INLKG AIG+GL DP  Q   Y
Sbjct:  160 DNFTLVQREITWNSEFAMLYIDNPVGTGFSFTDSQEGYSNNEDEIATNLYTFLQQFYKLYPEYYTNELYITGESYAGKYIPAFSYHIIQQNQNSNNPNINLKGIAIGDGLCDPITQVTQY 279          
BLAST of CX307782 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.285e-25
Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = 1
Query:    4 NMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDY 369
            NM+L   +  W    ++LY+D P GTGFS+T D      NE+ V+ DLY  L  FF+  P+   NDFY+TGESYAG Y+PA A  +H+ N  +E + INLKG AIG+G +DP      Y ++
Sbjct:  132 NMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVAQDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVRE-VKINLKGIAIGDGYSDPESIIGGYAEF 252          
The following BLAST results are available for this feature:
BLAST of CX307782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
SCP49_ARATH1.020e-6085.25Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
CBPX_ORYSJ1.166e-5680.49Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
CBP3_HORVU4.433e-5677.24Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SCP48_ARATH5.789e-5678.86Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
CBP3_ORYSJ5.789e-5677.24Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]
CBP3_WHEAT2.432e-5475.61Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
SCP47_ARATH1.207e-5376.23Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
SCP54_ARATH1.135e-3576.40Putative serine carboxypeptidase-like 54 OS=Arabid... [more]
CPVL_DICDI3.660e-2645.83Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
CPVL_PONAB5.285e-2545.08Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionC20001G11SK OF2 Citrus clementina cDNA clone C20001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307782 ID=CX307782; Name=CX307782; organism=Citrus clementina; type=EST; length=371bp
GATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAAGGCATCAAA
CCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTTACACTTCTG
ATAAACGTGACATTCGTCACAACGAAAATGGAGTTAGCAATGACCTCTAT
GACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGCAGAGAATGA
CTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTCCTGCATTTG
CTGCTCGAGTGCACAATGGGAACAAAGCTAAAGAAGGCATTCATATTAAT
TTGAAGGGTTTTGCCATTGGTAACGGGCTTACTGATCCCGGTGTCCAGTA
CAAAGCTTACCCAGATTATGC
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