CX307825

Overview
NameCX307825
Unique NameCX307825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.184e-72
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            HTAVDL+NE KLDDEIKSWLAFAAQKV+EVNALAKAL+GQKDE FFSANAAA ASRKSSPRVTNE VQKAA ALKGSDHRRAT VS+RLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRREYKAKKISEEEYV +IKEEI+KVVKLQEELDIDV
Sbjct:  332 HTAVDLINETKLDDEIKSWLAFAAQKVLEVNALAKALSGQKDEAFFSANAAALASRKSSPRVTNEAVQKAATALKGSDHRRATTVSSRLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEEYVKAIKEEISKVVKLQEELDIDV 485          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.020e-72
Identity = 140/154 (90.91%), Postives = 146/154 (94.81%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            HTAVDL+NE KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE  FSANAAA ASR+SSPRVTNE VQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRREYKAKK+SEE+YV +IKEEI KVV LQEELDIDV
Sbjct:  332 HTAVDLINETKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTNEGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQEELDIDV 485          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.710e-71
Identity = 138/154 (89.61%), Postives = 147/154 (95.45%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            HTAVDLVNE KLD EIKSWLAFAAQKVVEVNALAKALAG+KDE FFS NAAAQASRKSSPRVTN+ VQKAAAAL+GSDHRRAT VSARLDAQQKKLNLP+LPTTTIGSFPQT+ELRRVRREYKAKKISE++YV +IKEEI+KVVKLQEELDIDV
Sbjct:  332 HTAVDLVNEPKLDKEIKSWLAFAAQKVVEVNALAKALAGEKDEAFFSENAAAQASRKSSPRVTNQAVQKAAAALRGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTLELRRVRREYKAKKISEDDYVKAIKEEISKVVKLQEELDIDV 485          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 9.381e-70
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            HTAVDLVNE KLD EIKSWLAFAAQK+VEVNALAKAL G KDE FFS NAAAQASRKSSPRV NE VQKAAAAL+GS+HRR TNVSARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRRE+K  +ISEEEYV +IKEEINKVVKLQEELDIDV
Sbjct:  331 HTAVDLVNEPKLDQEIKSWLAFAAQKIVEVNALAKALTGHKDEAFFSPNAAAQASRKSSPRVNNEAVQKAAAALRGSEHRRVTNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKPTRISEEEYVKAIKEEINKVVKLQEELDIDV 484          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL +E KLD EI+SWLAFA QK+ E+N LA AL   +D+     +ANAAA  SR+ SPRV N  V+ A A +      RA+  + R   Q  +LNLP  PTTTIGSFPQT ++R+ RR++K+  + E  Y A+++ EI + V+ QE L++DV
Sbjct:  333 HVPVDLASEQKLDPEIRSWLAFALQKLDELNVLATALNEGRDKVADALAANAAAIDSRRRSPRVNNPAVKAALARIDAQLGNRASPYTQRAPKQSARLNLPAFPTTTIGSFPQTADIRQARRQFKSGALDEAGYRAAMQAEIERSVREQESLELDV 488          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.259e-31
Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL  E +LDDE+K WLAFA QK+ E+  L +A+   +D      + +AAA ASR +S RV N+ V+K AAA++  D  RA     R  AQQ +LNLP+LPTTTIGSFPQT E+R+ R +YK  ++    Y+  ++ EI  VV+ QE L +D+
Sbjct:  325 HVPVDLAAETRLDDELKGWLAFARQKLDELAVLKRAVIDGRDAAHAALAGSAAAIASRAASRRVHNDSVKKRAAAIRAQDAERAAPYPVRAAAQQARLNLPLLPTTTIGSFPQTAEIRQARAQYKRGELQALTYLERMRAEIADVVQRQEALGLDM 480          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30
Identity = 74/156 (47.44%), Postives = 96/156 (61.54%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL NE KLD EI+SWLAFA QK+ E+  LA AL   +D      +ANAAA  SR+ SPRV N  V+ A A +      RA+  + R   Q  +LNLP  PTTTIGSFPQT E+R+ R  +KA  + E  Y  +++ EI + V+ QE L++DV
Sbjct:  333 HVPVDLANEAKLDAEIRSWLAFALQKLDELKVLATALNEGRDTVADALAANAAAIESRRRSPRVNNPAVKAAIARIDARLGNRASPYAQRASKQSARLNLPAFPTTTIGSFPQTAEIRQARSRFKAGTLDEAGYRTAMQAEIERSVREQESLELDV 488          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL  E KLDDE+K WLAFA QK+ E+  + +AL       +G    N  A ASR  S RV N  V+K  AA++ +D  RA    AR DAQQ +LNLP+LPTTTIGSFPQT E+RR R ++K   +   +Y+  ++ EI  VV+ QE L +D+
Sbjct:  328 HVPVDLSAETKLDDELKGWLAFARQKLDELAVIKRALVEGPAAVQGELDDNRIAIASRTQSRRVHNAGVKKRVAAIRAADAVRAAPYPARADAQQARLNLPLLPTTTIGSFPQTPEIRRARAQHKRGDLPALDYLQRMRTEIADVVRRQEALGLDM 483          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANA---AAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ VDL  E+KLDDE+KSWLAFA QK  EV  LAKA+   +     +  A   A Q  R +SPR+    VQ   AA+K +D +RAT    R+  Q+  L+LP  PTTTIGSFPQT  +R  R+ +K  K++E +YV ++  EI   V++QE L +DV
Sbjct:  331 HSPVDLAREDKLDDELKSWLAFAVQKCQEVALLAKAINQPEAADVVTVLAQSRAVQHRRATSPRIHKPAVQARVAAIKPADSQRATAFEQRIAKQRAGLDLPAFPTTTIGSFPQTSAIRLARQSFKQGKLTEADYVEAMHSEIRHAVEIQENLGLDV 487          
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.564e-30
Identity = 72/157 (45.86%), Postives = 98/157 (62.42%), Query Frame = 2
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ VDL  E+ LD E+KSWLAFA QK  EV  LA+A    +     +A   + A QASR SSPR+    VQ   AA+K SD +R +  + R+  Q+  L+LP  PTTTIGSFPQT  +R  R+ +K  K+SE EY+ ++  EI   V++QE+L +DV
Sbjct:  332 HSPVDLEREDGLDAELKSWLAFAVQKCREVAVLARAATEPEAAEVLAALEESRAVQASRASSPRIHKPAVQARLAAIKASDAQRRSPFAERIARQRAGLDLPAFPTTTIGSFPQTSSIRLARQSFKQGKLSEAEYIEAMHSEIRHAVQIQEQLGLDV 488          
The following BLAST results are available for this feature:
BLAST of CX307825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_MESCR1.184e-7290.915-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH2.020e-7290.915-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO1.710e-7189.615-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC9.381e-7087.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA41.730e-3147.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO2.259e-3146.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ3.262e-3047.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ4.260e-3047.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE44.260e-3045.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE5.564e-3045.865-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC20002D08SK OF2 Citrus clementina cDNA clone C20002D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307825 ID=CX307825; Name=CX307825; organism=Citrus clementina; type=EST; length=464bp
TCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGATGAAATCA
AGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGAATGCATTG
GCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCTGCCAATGC
TGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAATGAGAGAG
TTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGACGTGCTACA
AACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAATCTTCCAAT
CCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGAACTTAGGA
GAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAGAATATGTT
GCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAAGAAGAGCT
TGATATTGATGTCC
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