CX307827

Overview
NameCX307827
Unique NameCX307827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length543
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307827 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 9.092e-13
Identity = 42/63 (66.67%), Postives = 45/63 (71.43%), Query Frame = 3 
Query:    3 STAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVDTKP--ANPV--NGPLQ*LQECLEKTAA 179
            STAKAVEWDAAWSKN DPSGRAALGVH AAYE+ +   P  ANPV  NG    L E + KT A
Sbjct:  524 STAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASANPVLDNGFGPALGESMVKTVA 586
The following BLAST results are available for this feature:
BLAST of CX307827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASNS_ORYSJ9.092e-1366.67Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
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Properties
Property NameValue
Genbank descriptionC20002D11SK OF2 Citrus clementina cDNA clone C20002D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307827 ID=CX307827; Name=CX307827; organism=Citrus clementina; type=EST; length=543bp
GCAGTACGGCAAAGGCAGTGGAATGGGATGCAGCATGGTCTAAAAATCCT
GACCCATCTGGTCGTGCTGCCCTTGGTGTGCATGCAGCTGCATACGAGGA
AGCTGTGGACACTAAGCCTGCAAATCCAGTAAATGGCCCTCTGCAGTAAC
TCCAAGAGTGTCTAGAGAAAACAGCAGCGGTTGTTTGATTGACTTCAAGC
TTTCATCTGTGGCATGGTAGCAAGGGTTAATCACTTACTTTCAAGATCAT
GTGGCATAGAGTCGTAGCGATAAACTTCTGCAGAATTACATCATCACCAG
GGTTAAAGAGCTATTGTTATATATCCGTCTCCAATGCTTTTGTCTTATTG
TTGGTGTTTTTGTAGACATTGTCTCTTCAGTTGTGTACGCTCCCATGTTT
TCACTAGGTTCTCTTCTCCTGTTTTCACTAGGTTTCCTTCTCCTGTTTAT
CTATGAACGGTAATGAGTTGCACTTGTTGGATGAATTCATACCTTTTCTT
CTTCGATTTATCCTTTATTTTGGTTCTTATAAAAAAAAAAGGG
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