CX307838

Overview
NameCX307838
Unique NameCX307838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length537
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307838 vs. ExPASy Swiss-Prot
Match: ANAG_HUMAN (Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGLU PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 2 
Query:   44 ELVEDMDSLLACHDGFLLGPWLESAKQLAQNEEQEKQYEWNARTQITMWFDNTEEEASLLRDYGNKYWSGLLRDYYGPRAAIYFKYMIESLESGDGFRLKDWRREWIKLTNDWQNGRNVYPVESNGDALITSQWLYNKYLQG 469
            EL+  +D +LA    FLLG WLE A+  A +E +   YE N+R Q+T+W      E ++L DY NK  +GL+ +YY PR  ++ + +++S+  G  F+   + +   +L   +   +  YP +  GD +  ++ ++ KY  G
Sbjct:  601 ELLPALDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLW----GPEGNIL-DYANKQLAGLVANYYTPRWRLFLEALVDSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPG 737
The following BLAST results are available for this feature:
BLAST of CX307838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANAG_HUMAN1.937e-1531.69Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=N... [more]
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Properties
Property NameValue
Genbank descriptionC20002E12SK OF2 Citrus clementina cDNA clone C20002E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307838 ID=CX307838; Name=CX307838; organism=Citrus clementina; type=EST; length=537bp
AAATGATGCTCATGGAGTTTTCCAGTTGAGTAGGAGGTTTTTAGAACTTG
TGGAAGATATGGACAGTCTCCTAGCATGCCATGATGGGTTTCTTCTAGGA
CCTTGGTTAGAAAGTGCCAAACAACTTGCCCAAAATGAAGAACAAGAAAA
ACAGTATGAATGGAATGCAAGAACTCAAATAACTATGTGGTTCGACAACA
CAGAGGAGGAAGCAAGTCTGCTTCGTGATTACGGAAACAAGTACTGGAGT
GGACTTCTACGAGACTACTATGGTCCCCGAGCAGCGATATACTTCAAATA
TATGATAGAATCATTGGAGAGTGGCGATGGCTTCCGTTTGAAGGATTGGA
GGAGGGAATGGATAAAGCTTACAAATGATTGGCAGAACGGCAGAAACGTT
TACCCGGTGGAGAGTAACGGTGATGCTTTGATCACATCACAATGGCTCTA
TAACAAGTACTTGCAAGGAACGAGCGTATTTGATCACTGATGGAAGCTGC
CATAATCCCAAATTAAATGGACCTTTTGGCGTGTTGA
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