CX307839

Overview
NameCX307839
Unique NameCX307839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length539
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.182e-51
Identity = 93/108 (86.11%), Postives = 105/108 (97.22%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQEPVLPGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEY+HY DIK+LPPHRL+EIRRFFEDYKKNENK+VAV++FLP ++AV AIQYSMDLYAEYILH+LR+
Sbjct:  104 LVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFEDYKKNENKDVAVDDFLPPNSAVNAIQYSMDLYAEYILHSLRK 211          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 8.580e-48
Identity = 87/108 (80.56%), Postives = 99/108 (91.67%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQE V+PGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEY+H+ DIKE+PPHRL EIRRFFEDYKKNENKEVAVNEFLP+  A+ AI+YSMDLY  YI+ +LR+
Sbjct:  107 LVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 8.580e-48
Identity = 87/108 (80.56%), Postives = 99/108 (91.67%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQE V+PGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEY+H+ DIKE+PPHRL EIRRFFEDYKKNENKEVAVNEFLP+  A+ AI+YSMDLY  YI+ +LR+
Sbjct:  107 LVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.912e-47
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQEPV+PG FLRA+AIGLMPMIDQGEKDDKIIAVCADDPEY+HYNDI EL PHRL EI+RFFEDYKKNENKEVAV+ FLP++ A EAIQYSMDLYA+YIL +LR+
Sbjct:  107 LVLMQEPVVPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPATTAREAIQYSMDLYAQYILQSLRQ 214          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 7.517e-44
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQEPVL G FLRA+AIGLMPMIDQGEKDDKIIAVCADDPE++HY DIKELPPHRL+EIRRFFEDYKKNENK+V V  FLP+ AA++AI+ SMDLYA YI   L+R
Sbjct:  111 LVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 82/108 (75.93%), Postives = 94/108 (87.04%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAEYILHTLRR 326
            L+LMQEPV+PG FLRA+AIGLMPMIDQGEKDDKIIAVCADDPEY+HY+    L P RL EI+R  EDYKKNENKEVAV+ FLP++ A EAIQYSMDLYA+YIL +LR+
Sbjct:  110 LVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYSTSVSLLP-RLQEIKR-LEDYKKNENKEVAVDAFLPATTAREAIQYSMDLYAQYILQSLRQ 215          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.399e-34
Identity = 68/108 (62.96%), Postives = 89/108 (82.41%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAE-YILHTLR 323
            L+LMQEPV+P CFLRAK IG+M M+DQGE+DDK+IAV ADDPEYK + DI +LPPHRL+EI+RFFEDYKKNE+KEV V++FL +  A + ++ S+++Y E Y+   LR
Sbjct:   81 LVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLR 188          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.802e-21
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLY 296
            L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D    H NDI ELPPH   E++ FFEDYKK ENK V + EF  +  A + +  S++LY
Sbjct:   74 LVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFEDYKKLENKTVVIEEFQNAILARKIVLDSLELY 171          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.802e-21
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLY 296
            L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D    H NDI ELPPH   E++ FFEDYKK ENK V + EF  +  A + +  S++LY
Sbjct:   74 LVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFEDYKKLENKTVVIEEFQNAILARKIVLDSLELY 171          
BLAST of CX307839 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri GN=ppa PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:    3 LILMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSSAAVEAIQYSMDLYAE 302
            L++MQ+P  PGC + A+ IGLM M+D  ++DDK++AV  +DP +K   D+ ++P H L EI   F +YK+ E KE  V  +  + AA EAI ++++LY E
Sbjct:   74 LVIMQDPTFPGCVIEARPIGLMKMLDDSDQDDKVLAVPTEDPRFKDVKDLDDVPKHLLDEIAHMFSEYKRLEGKETEVLGWEGADAAKEAIVHAIELYEE 173          
The following BLAST results are available for this feature:
BLAST of CX307839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
IPYR_SOLTU2.182e-5186.11Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR_ORYSJ8.580e-4880.56Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI8.580e-4880.56Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_MAIZE1.912e-4782.41Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR2_ARATH7.517e-4478.70Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR_HORVD2.502e-3975.93Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR2_CHLRE5.399e-3462.96Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
IPYR_LEPIN1.802e-2151.02Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC1.802e-2151.02Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_METKA7.569e-2043.00Inorganic pyrophosphatase OS=Methanopyrus kandleri... [more]

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Properties
Property NameValue
Genbank descriptionC20002F01SK OF2 Citrus clementina cDNA clone C20002F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307839 ID=CX307839; Name=CX307839; organism=Citrus clementina; type=EST; length=539bp
TTTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCCTGCGGGCC
AAGGCTATTGGATTAATGCCCATGATTGATCAGGGAGAAAAAGATGATAA
GATCATTGCAGTTTGTGCCGATGATCCAGAGTATAAGCACTACAATGACA
TCAAAGAGCTTCCCCCTCATCGCCTTTCCGAGATCCGTCGTTTCTTTGAA
GATTACAAGAAAAATGAGAACAAGGAGGTAGCAGTTAATGAATTTTTACC
TTCTTCTGCTGCTGTTGAAGCCATCCAGTACTCAATGGATCTTTATGCCG
AGTACATTCTGCACACCCTGAGGCGGTAGGCACTTCCCTTTTTTTTTCTT
TGCCCCAACCCTTTGATAATCGAGGGAAATACGTCAATTTGAATAAGTTA
TTTTCTCAATGTATTTTGAAGGTTAGATAAACTCAATGTTTCTACATTTT
GATACTTTTGATGATAATTTGTGCTTGTCTTTTGAACAATTTTATGGAAA
GAAATGGCAAATGAATGTCTATCAAAAAAAAAAAAAAAA
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