CX307840

Overview
NameCX307840
Unique NameCX307840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 2.063e-69
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 392
            VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD+TQIHTHMCYS+FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA
Sbjct:  562 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 691
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 2.281e-68
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 392
            VTILNWSFVRNDQPRHETCYQIALAIK+EVEDLEKAGINVIQIDEAALREGLPLRKSEH FYL WAVHSFRITN GVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA
Sbjct:  562 VTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALREGLPLRKSEHDFYLKWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 691
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 3.891e-68
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 392
            VTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGI VIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN GVQDTTQIHTHMCYSNFNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGA
Sbjct:  561 VTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGA 690
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 9.584e-67
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGA 392
            VTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK+EHAFYLDWAVHSFRITN  +QDTTQIHTHMCYSNFNDIIHSIIDMDADV+TIENSRS EKLLSVFREGVKYGA
Sbjct:  562 VTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNLPLQDTTQIHTHMCYSNFNDIIHSIIDMDADVMTIENSRSSEKLLSVFREGVKYGA 691
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 9.964e-48
Identity = 90/123 (73.17%), Postives = 107/123 (86.99%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 371
            VTILNWSFVR+DQPR ++C Q+ALAI++EV+DLEKAG+N+IQIDEAALREGLPLR+S+ A YL+WA++SFRI   GV D+TQIHTHMCYS FNDII +I  MDADVITIE SRSD +LL  FR
Sbjct:  560 VTILNWSFVRDDQPRKDSCLQLALAIREEVQDLEKAGVNIIQIDEAALREGLPLRQSDWATYLEWAINSFRIAANGVDDSTQIHTHMCYSEFNDIIEAIARMDADVITIETSRSDMELLDAFR 682
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.220e-47
Identity = 95/128 (74.22%), Postives = 106/128 (82.81%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKY 386
            VTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YL WAV SFRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE SRSD +LL  F +  KY
Sbjct:  565 VTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DNFKY 691
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.220e-47
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALREGLPLR+++   YL WAV +FRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE SRSD +LL  F
Sbjct:  565 VTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.220e-47
Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ VIQIDEAALREGLPLR+++ + YL WAV SFRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE SRSD +LL  F
Sbjct:  565 VTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEQAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.220e-47
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALREGLPLR+++   YL WAV +FRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE SRSD +LL  F
Sbjct:  565 VTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.899e-47
Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 3 
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++ + YL WAV SFRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE SRSD +LL  F
Sbjct:  565 VTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF 686
The following BLAST results are available for this feature:
BLAST of CX307840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ARATH2.063e-6996.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR2.281e-6896.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC3.891e-6896.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO9.584e-6794.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV9.964e-4873.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS32.220e-4774.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM2.220e-4776.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ2.220e-4776.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA42.220e-4776.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH2.899e-4776.235-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC20002F02SK OF2 Citrus clementina cDNA clone C20002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307840 ID=CX307840; Name=CX307840; organism=Citrus clementina; type=EST; length=393bp
CTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAGACAT
GAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGGATCT
TGAGAAGGCAGGCATTAACGTTATTCAAATTGATGAGGCTGCCTTGAGGG
AAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCA
GTCCACTCCTTCAGAATCACCAACTGTGGTGTCCAGGACACTACCCAGAT
CCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTA
TCGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAG
AAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTG
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