CX307843

Overview
NameCX307843
Unique NameCX307843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length492
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: CAS1_ARATH (Cycloartenol synthase OS=Arabidopsis thaliana GN=CAS1 PE=1 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 3.407e-63
Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNVN 491
            NV++SLQN+ GG+A+YE TRSY W+E++NP E FG+ +IDY YVECTS+ IQ L SF K YP HR++E++E I K   FIESIQ  DGSWYGSW VCFTYGTWFG+KGLV  G+  +NS  + KAC+FLLSKQ  SGGWGESYLSC D+VY+NL+GN++H VN
Sbjct:  517 NVIISLQNADGGLATYELTRSYPWLELINPAETFGDIVIDYPYVECTSAAIQALISFRKLYPGHRKKEVDECIEKAVKFIESIQAADGSWYGSWAVCFTYGTWFGVKGLVAVGKTLKNSPHVAKACEFLLSKQQPSGGWGESYLSCQDKVYSNLDGNRSHVVN 679          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: LAS1_ARATH (Lanosterol synthase OS=Arabidopsis thaliana GN=LAS1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.309e-58
Identity = 107/163 (65.64%), Postives = 124/163 (76.07%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNVN 491
            N +LSLQN +GG ASYE TRSY  +E++NP E FG+ IIDYQYVECTS+ IQ L  FT     ++R+EI   I K   FIE  Q PDGSWYGSWGVCFTY TWFGIKG++ SG+ YE+S  IRKAC FLLSKQL  GGWGESYLSC ++VYTNL GNK+H VN
Sbjct:  517 NFILSLQNKNGGFASYELTRSYPELEVINPSETFGDIIIDYQYVECTSAAIQGLVLFTTLNSSYKRKEIVGSINKAVEFIEKTQLPDGSWYGSWGVCFTYATWFGIKGMLASGKTYESSLCIRKACGFLLSKQLCCGGWGESYLSCQNKVYTNLPGNKSHIVN 679          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: PEN6_ARATH (Pentacyclic triterpene synthase 6 OS=Arabidopsis thaliana GN=PEN6 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.370e-48
Identity = 83/163 (50.92%), Postives = 115/163 (70.55%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNVN 491
            N++L  Q+ +GG+  +E  R   W+E L+PVE   ++I++++YVECT S I  L  F K +P+HRR E+E+FI     +IES Q PDGSWYG+WGVCF YGT+F ++GLV +G+ Y+N + IRKA  F+L  Q   GGWGESYLSC ++ YT LEGN+ + VN
Sbjct:  526 NLLLYFQSKNGGITVWEAARGRTWLEWLSPVEFMEDTIVEHEYVECTGSAIVALARFLKEFPEHRREEVEKFIKNAVKYIESFQMPDGSWYGNWGVCFMYGTFFAVRGLVAAGKTYQNCEPIRKAVQFILETQNVEGGWGESYLSCPNKKYTLLEGNRTNVVN 688          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: PEN7_ARATH (Putative pentacyclic triterpene synthase 7 OS=Arabidopsis thaliana GN=PEN7 PE=5 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 3.422e-47
Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNVN 491
            N++L LQ+ +GG A +ER     W+E L+P+E   E+I++++YVECT S +  L  F K +P+HR +EIE FIAK   +IES+Q  DGSWYG+WGVCF Y T+F ++GLV +G+ Y++ + IR+A  FLL  Q D GGWGES+LSC  + Y +LEGNK + VN
Sbjct:  386 NMLLYLQSENGGKAVWERASGKKWLEWLSPIEFMEETILEHEYVECTGSAVVVLTRFMKQFPRHRTKEIETFIAKAVKYIESLQMADGSWYGNWGVCFIYATFFAVRGLVAAGKTYQSYEPIRRAVQFLLKIQNDEGGWGESFLSCPGKKYISLEGNKTNVVN 548          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: LUP3_ARATH (Camelliol C synthase OS=Arabidopsis thaliana GN=CAMS1 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.942e-46
Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 3
Query:    6 VVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNV 488
            ++LSLQ+ +GGV ++E  R   W+E+LNP E F + +++++Y ECTSS IQ L  F + YP HR  EI   I K   +IESIQ  DGSWYGSWGVCFTY TWFG+ GL  +G+ Y N  ++RK   FLL+ Q D+GGWGESYLSC  + Y   EG +++ V
Sbjct:  521 ILLSLQSKNGGVTAWEPARGQEWLELLNPTEVFADIVVEHEYNECTSSAIQALILFKQLYPNHRTEEINTSIKKAVQYIESIQMLDGSWYGSWGVCFTYSTWFGLGGLAAAGKTYNNCLAMRKGVHFLLTTQKDNGGWGESYLSCPKKRYIPSEGERSNLV 681          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: CAS1_DICDI (Cycloartenol synthase OS=Dictyostelium discoideum GN=cas1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.878e-45
Identity = 91/162 (56.17%), Postives = 109/162 (67.28%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRR-REIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHN 485
            NV+L+LQN  GG ASYE TR   W+E  NP E F   +IDY YVEC+++ IQ + +F KH P H R +EI   IA+G  FI+SIQR DGSW GSWG+CFTYGTWFGI+GLV SG     S SI KAC FL SKQ   GGWGES+ S V + Y   E ++  N
Sbjct:  466 NVLLTLQNGDGGWASYENTRGPKWLEKFNPSEVFQNIMIDYSYVECSAACIQAMSAFRKHAPNHPRIKEINRSIARGVKFIKSIQRQDGSWLGSWGICFTYGTWFGIEGLVASGEPL-TSPSIVKACKFLASKQRADGGWGESFKSNVTKEYVQHETSQVVN 626          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: LUP4_ARATH (Beta-amyrin synthase OS=Arabidopsis thaliana GN=BAS PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 2.453e-45
Identity = 76/151 (50.33%), Postives = 109/151 (72.19%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVY 455
            N++LSLQ+ +GG+ ++E   +  W+E+LNP E F + +I+++Y ECTSS IQ L  F + YP HR  EI  FI K A ++E++Q  DGSWYG+WG+CFTYGTWF + GL  +G+ + + ++IRK   FLL+ Q D+GGWGESYLSC  ++Y
Sbjct:  520 NILLSLQSKNGGMTAWEPAGAPKWLELLNPTEMFSDIVIEHEYSECTSSAIQALSLFKQLYPDHRTTEITAFIKKAAEYLENMQTRDGSWYGNWGICFTYGTWFALAGLAAAGKTFNDCEAIRKGVQFLLAAQKDNGGWGESYLSCSKKIY 670          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: LUP5_ARATH (Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.464e-45
Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNV 488
            N++LSLQ+ +GG  ++E  R+Y WME++NP + F  ++ + +Y ECTS+ +Q L  F + YP HR +EI + I K   FIES Q  DGSWYGSWG+CFTYGTWF + GL   G+ Y N  S+R    FLL+ Q + GGWGESY+SC ++ Y  LEGN+++ V
Sbjct:  520 NLMLSLQSENGGFTAWEPVRAYKWMELMNPTDLFANAMTEREYTECTSAVLQALVIFNQLYPDHRTKEITKSIEKAVQFIESKQLRDGSWYGSWGICFTYGTWFALCGLAAIGKTYNNCLSMRDGVHFLLNIQNEDGGWGESYMSCPEQRYIPLEGNRSNVV 681          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: LUP1_ARATH (Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.217e-44
Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNV 488
            N++LSLQ+ +GGV ++E +R+Y W+E+LNP E    ++++ ++VECTSS IQ L  F K YP HR++EI   I K   FI+  Q PDGSWYG+WGVCF Y TWF + GL  +G  Y +  ++R    FLL+ Q D GGWGESYLSC ++ Y   EG +++ V
Sbjct:  517 NLLLSLQSGNGGVNAWEPSRAYKWLELLNPTEFMANTMVEREFVECTSSVIQALDLFRKLYPDHRKKEINRSIEKAVQFIQDNQTPDGSWYGNWGVCFIYATWFALGGLAAAGETYNDCLAMRNGVHFLLTTQRDDGGWGESYLSCSEQRYIPSEGERSNLV 678          
BLAST of CX307843 vs. ExPASy Swiss-Prot
Match: PEN3_ARATH (Probable pentacyclic triterpene synthase 3 OS=Arabidopsis thaliana GN=PEN3 PE=3 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 1.590e-44
Identity = 77/163 (47.24%), Postives = 114/163 (69.94%), Query Frame = 3
Query:    3 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGSWYGSWGVCFTYGTWFGIKGLVDSGRKYENSQSIRKACDFLLSKQLDSGGWGESYLSCVDRVYTNLEGNKAHNVN 491
            N++L +Q+ +GG++ +E      W+E L+P+E   ++I++++Y+ECT S I  L  F K +P HR  E+++FI KG  +IES+Q  DGSWYG+WG+CF YGT+F ++GLV +G  Y+N ++IR+A  FLL  Q   GGWGES+LSC ++ Y  LEGNK   VN
Sbjct:  520 NMLLYMQSRNGGISIWEAASGKKWLEWLSPIEFIEDTILEHEYLECTGSAIVVLARFMKQFPGHRTEEVKKFITKGVKYIESLQIADGSWYGNWGICFIYGTFFAVRGLVAAGNTYDNCEAIRRAVRFLLDIQNGEGGWGESFLSCPNKNYIPLEGNKTDVVN 682          
The following BLAST results are available for this feature:
BLAST of CX307843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
CAS1_ARATH3.407e-6365.03Cycloartenol synthase OS=Arabidopsis thaliana GN=C... [more]
LAS1_ARATH4.309e-5865.64Lanosterol synthase OS=Arabidopsis thaliana GN=LAS... [more]
PEN6_ARATH2.370e-4850.92Pentacyclic triterpene synthase 6 OS=Arabidopsis t... [more]
PEN7_ARATH3.422e-4750.92Putative pentacyclic triterpene synthase 7 OS=Arab... [more]
LUP3_ARATH4.942e-4651.55Camelliol C synthase OS=Arabidopsis thaliana GN=CA... [more]
CAS1_DICDI1.878e-4556.17Cycloartenol synthase OS=Dictyostelium discoideum ... [more]
LUP4_ARATH2.453e-4550.33Beta-amyrin synthase OS=Arabidopsis thaliana GN=BA... [more]
LUP5_ARATH5.464e-4549.38Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 ... [more]
LUP1_ARATH1.217e-4448.77Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 ... [more]
PEN3_ARATH1.590e-4447.24Probable pentacyclic triterpene synthase 3 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionC20002F05SK OF2 Citrus clementina cDNA clone C20002F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307843 ID=CX307843; Name=CX307843; organism=Citrus clementina; type=EST; length=492bp
TAAATGTTGTGTTGTCCTTACAGAACAGCAGCGGGGGAGTTGCATCGTAC
GAACGGACAAGATCTTATGCTTGGATGGAGATGTTAAATCCAGTTGAAAA
TTTTGGAGAGAGCATTATAGATTACCAGTATGTGGAATGCACTTCATCGA
CAATCCAATGCCTAAAATCATTCACAAAGCATTATCCGAAACATCGAAGG
AGAGAAATTGAAGAATTTATAGCCAAGGGAGCCAACTTCATTGAGAGCAT
ACAACGACCCGATGGCTCGTGGTACGGGTCATGGGGAGTGTGCTTCACAT
ATGGAACATGGTTCGGTATAAAGGGGCTGGTGGATTCTGGAAGAAAATAT
GAAAACAGCCAGAGCATTAGAAAAGCTTGTGATTTCTTGCTATCCAAACA
GCTTGATTCTGGTGGCTGGGGAGAAAGCTACCTTTCTTGTGTTGATAGGG
TTTACACAAATTTGGAAGGAAACAAGGCACATAATGTAAACA
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