CX307844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.189e-93 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 RTRTIITGSRNVVDGSTTFKSAT AVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK Sbjct: 331 RTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 447 HSP 2 Score: 128.642 bits (322), Expect = 1.189e-93 Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLK VQGSFPTYLGRPWKEYSRTVIMQSSITDLIH Sbjct: 447 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 510
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 3.443e-93 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK Sbjct: 331 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 447 HSP 2 Score: 125.561 bits (314), Expect = 3.443e-93 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 KNMVTAQGR DPNQNTGIVIQKSRIGATSDLK VQGSFPTYLGRPWKEYSRTVIMQSSITD+IH Sbjct: 447 KNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIH 510
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 3.178e-85 Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 RTRTIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQK Sbjct: 339 RTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQK 455 HSP 2 Score: 115.546 bits (288), Expect = 3.178e-85 Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KNMVTAQGRTDPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+D+I Sbjct: 455 KNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVI 517
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 4.556e-81 Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 RT TIIT S+NV DGSTTF SATVA VG GFLARDITFQNTAG +KHQAVALRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQK Sbjct: 66 RTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQK 182 HSP 2 Score: 118.627 bits (296), Expect = 4.556e-81 Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDL+ VQ SFPTYLGRPWKEYSRTV+MQSSIT++I+ Sbjct: 182 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVIN 245
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.435e-79 Identity = 102/117 (87.18%), Postives = 107/117 (91.45%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 R +TIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQK Sbjct: 334 RGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQK 450 HSP 2 Score: 109.768 bits (273), Expect = 1.435e-79 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KNMVTAQGR+DPNQNTGIVIQ RIG TSDL V+G+FPTYLGRPWKEYSRTVIMQS I+D+I Sbjct: 450 KNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVI 512
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 8.430e-77 Identity = 94/117 (80.34%), Postives = 100/117 (85.47%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 ++ TIIT SRNV DGSTTF SATV V LARDITFQNTAG SKHQAVAL VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQK Sbjct: 330 KSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQK 446 HSP 2 Score: 118.242 bits (295), Expect = 8.430e-77 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KNMVTAQGRTDPNQNTGIVIQK RIGATSDL+ VQ SFPTYLGRPWKEYSRTVIMQSSITD+I Sbjct: 446 KNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVI 508
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 5.748e-60 Identity = 80/112 (71.43%), Postives = 93/112 (83.04%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNS 343 +TIITGS++V G+TTF SATVA VG+GF+AR ITF+NTAG S QAVALR G+DLS FY C AYQDTLYVHSNRQF+ +C + GTVDFIFGNAAAVLQNC+I AR+P S Sbjct: 262 KTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS 373 HSP 2 Score: 87.8113 bits (216), Expect = 5.748e-60 Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N +TAQGR+DPNQNTGI+I SR+ A SDL+ V GS TYLGRPW++YSRTV M++S+ LI Sbjct: 376 NTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLI 437
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.284e-59 Identity = 80/115 (69.57%), Postives = 95/115 (82.61%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 +T I G+R+VVDG TTF+S+TVAVVG GF+AR I+F+N AGPSKHQAVALR GAD SAFY C + YQDTLYVHS RQF+ C + GT+DFIFGNAAAVLQ C+++ARKPN QK Sbjct: 69 KTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQK 183 HSP 2 Score: 80.1073 bits (196), Expect = 6.284e-59 Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KN+ TAQGR DPNQNTGI I ++ A +DL V SF TYLGRPWKEYSRTV + S + LI Sbjct: 183 KNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLI 245
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.387e-58 Identity = 80/110 (72.73%), Postives = 91/110 (82.73%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKP 337 +TIITGS++V G+TTFKSATVAVVG+ F+ARDIT +NTAGP+ HQAVALR G+DLS FY C YQDTLYVHS RQF+ C I GTVDFIFGNAA VLQNC+I ARKP Sbjct: 260 KTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP 369 HSP 2 Score: 82.4185 bits (202), Expect = 1.387e-58 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 N +TAQGRTDPNQ+TGI+I R+ A SDLK VQ S T+LGRPWK+YSRTV +++ + LI+ Sbjct: 374 NTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLIN 436
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.342e-57 Identity = 78/114 (68.42%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 11 TIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 TIITGS NV+DGSTTF+SATVA G+GF+A+DI FQNTAGP+KHQAVALRV AD + C + AYQDTLY H+ RQF+ + I GTVDFIFGN+A V QNCDI AR P +GQK Sbjct: 307 TIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQK 420 HSP 2 Score: 83.1889 bits (204), Expect = 3.342e-57 Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KNM+TAQGR D NQNT I IQK +I A+SDL V+GS T+LGRPWK YSRTVIMQS I + I Sbjct: 420 KNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHI 482 The following BLAST results are available for this feature:
BLAST of CX307844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307844 ID=CX307844; Name=CX307844; organism=Citrus clementina; type=EST; length=541bpback to top |