CX307848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 4.225e-55 Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGI-AGGLDEKDDGA 434 EADD+KRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELP++TRLNEGI AGGLDE+ D A Sbjct: 18 EADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIGAGGLDEEMDTA 131
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.399e-50 Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDDG 431 EADD+KRELVFKEDGQEYAQV RMLGNGRCEA+C+DGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP++ RLNEG+ E+ +G Sbjct: 18 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGVDVDGPEEGEG 129
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 7.736e-41 Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 7.736e-41 Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 7.736e-41 Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.724e-40 Identity = 80/111 (72.07%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4) HSP 1 Score: 165.622 bits (418), Expect = 1.724e-40 Identity = 80/111 (72.07%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 2.251e-40 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 2.251e-40 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX307848 vs. ExPASy Swiss-Prot
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.130e-38 Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 3 Query: 96 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEKDD 428 E + EKRELVFKEDGQEYAQV++MLGNGR EAM DG KRL HIRGK+ KKVWI DIILVGLR+YQD+KADVILKY DEAR LKAYGELPE ++NE G + D+ Sbjct: 18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128 The following BLAST results are available for this feature:
BLAST of CX307848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX307848 ID=CX307848; Name=CX307848; organism=Citrus clementina; type=EST; length=605bpback to top |