CX307850

Overview
NameCX307850
Unique NameCX307850
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length476
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 4.040e-34
Identity = 75/158 (47.47%), Postives = 95/158 (60.13%), Query Frame = 2
Query:    2 LVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKALH 475
            +VQ+IS  NE   KP INL+GYILGNP TD+  + NS+IP+AH MGLIS+ELYESLK TC G YV VDP N  CL  ++ + K  S + +  IL   C   SP P +  H  RS       Q  +  + + P   C  Y YLLA +W ND +VR+ LH
Sbjct:  189 IVQQISIGNEHGYKPQINLKGYILGNPSTDLDSDHNSKIPYAHRMGLISDELYESLKRTCQGNYVKVDPTNTKCLKLMEDYGKCVSRINEGLILIALCDLASPNPYSGEHGGRS-----YLQTLVQSDLSLPTPDCYMYRYLLASHWANDEDVRRELH 341          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.001e-34
Identity = 72/160 (45.00%), Postives = 103/160 (64.38%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQ---FFSPKPRASSHNRRSLNVNEQSQEF-LNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ+IS  NE+ + PLIN+QGY+LGNP TD  +E N ++PFAHGMGLIS+EL+ESL+ +CGG++ NVDP+N  C N++Q +    S +   HIL  +C+     +  P   +  RR +      +EF +N   + PP  C +Y Y L+ +W ND NVR+AL
Sbjct:  188 VQQISLGNEKGLTPLINIQGYVLGNPVTDKNIETNYRVPFAHGMGLISDELFESLERSCGGKFFNVDPSNARCSNNLQAYDHCMSEIYSEHILLRNCKVDYVLADTPNIRTDRRRVM------KEFSVNDSSSLPPPSCFTYRYFLSAFWANDENVRRAL 341          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.885e-30
Identity = 73/156 (46.79%), Postives = 89/156 (57.05%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ IS  N +  KP INLQGY+LGNP TD  ++ NSQIP+AHGM LIS+ELYESLK  C GEY +VDP N +CL  ++ F++ TS + +SHIL P C                        E  NP+       C  Y Y L+ YW ND  VRKAL
Sbjct:  194 VQEISKGNYQCCKPPINLQGYMLGNPITDSKIDGNSQIPYAHGMALISDELYESLKRICKGEYEHVDPYNTECLKLLEEFNECTSKLYRSHILYPLC------------------------EMTNPD-------CYIYRYSLSHYWVNDETVRKAL 318          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.885e-30
Identity = 70/156 (44.87%), Postives = 87/156 (55.77%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ IS  N E   P INLQGY+LGNP TD V + NS+IPFAHGM LIS+EL+ESLK TC G+Y NV P N +CL  I+ F+K T+ + +  I++P C+  +P                                C  Y +LLA YW ND  VRKAL
Sbjct:  194 VQEISKGNYECCNPPINLQGYVLGNPLTDFVYDYNSRIPFAHGMALISDELFESLKKTCKGDYRNVHPRNTECLKFIEEFNKCTNSICQRRIIDPFCETETP-------------------------------NCYIYRFLLAAYWANDETVRKAL 318          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.345e-29
Identity = 71/156 (45.51%), Postives = 85/156 (54.49%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ IS  N E   P INLQGY+LGNP TD  ++ NS+IPFAHGM LIS+ELYESLK TC GEY NV P N  CL  I+ F+K T+ + +  IL+P C+  +P                                C  Y YLL  YW ND  VR+AL
Sbjct:  194 VQEISKGNYECCNPPINLQGYVLGNPLTDYAIDSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPRNTQCLKFIEEFNKCTNRILQQLILDPLCETETP-------------------------------DCYIYRYLLTTYWANDATVREAL 318          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.139e-28
Identity = 70/156 (44.87%), Postives = 83/156 (53.21%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ IS  N E   P INLQGY+LGNP TD     NS+IPFAHGM LIS+ELYESLK TC GEY NV P N  CL  ++ F+K T+ + +  IL+P C+  +P                                C  Y YLL  YW ND  VR+AL
Sbjct:  194 VQEISKGNYECCNPPINLQGYVLGNPLTDYTTGSNSRIPFAHGMALISDELYESLKKTCKGEYTNVHPRNTQCLKFVEEFNKCTNRIFQQLILDPLCETETP-------------------------------DCYIYRYLLTTYWANDATVREAL 318          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.651e-28
Identity = 69/158 (43.67%), Postives = 83/158 (52.53%), Query Frame = 2
Query:    2 LVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKALH 475
            LVQ IS  N    KP INLQGYILGNP T+  V+ N +IP+AHGM LIS+ELYES+K  C G+Y NVDP N  CL  +  + K T  + K+ I+ P C   SP                                C  Y YLL  YW ND NV++ALH
Sbjct:  189 LVQEISKGNYVCCKPPINLQGYILGNPSTENEVDINYRIPYAHGMALISDELYESMKRICKGKYENVDPRNTKCLKLVGEYQKCTKRINKALIITPECVDTSP-------------------------------DCYMYRYLLTTYWANDENVQRALH 315          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.147e-27
Identity = 68/156 (43.59%), Postives = 86/156 (55.13%), Query Frame = 2
Query:    5 VQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            VQ IS  N +     INLQGY+LGNP TD V + N ++PFAH M LIS+ELYESLK TC GEYVNV P++ +CL  ++ F+KLT+ V + HIL   C+  +P                                C SY ++L  YW ND  VRKAL
Sbjct:  194 VQEISKGNCQCCNRPINLQGYVLGNPLTDCVYDCNYRVPFAHKMALISDELYESLKRTCRGEYVNVHPHDTECLKFVEEFNKLTNRVCERHILHSCCETETP-------------------------------SCYSYRFMLTTYWANDETVRKAL 318          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.784e-27
Identity = 67/157 (42.68%), Postives = 87/157 (55.41%), Query Frame = 2
Query:    2 LVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            +VQ ISN N    KP I LQGY+LG+P TD  +++NS+I FAHGM LISNELYES+K TCGG Y+ VDP N +CL  I+ +    SG+ ++ IL P C   SP                                C SY  +L+ YW N+ +VR+AL
Sbjct:  187 IVQEISNGNCIYGKPQIRLQGYVLGSPVTDYDLDRNSRIQFAHGMALISNELYESMKRTCGGNYIFVDPLNTECLELIKDYDNCVSGIYENLILVPKCDLTSP-------------------------------DCHSYRSMLSDYWANNESVRRAL 312          
BLAST of CX307850 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.248e-27
Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 2
Query:    2 LVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSHNRRSLNVNEQSQEFLNPEPTFPPIGCRSYGYLLARYWDNDHNVRKAL 472
            +VQ ISN N  D KP INLQG++LGNP TD  ++ NS+IPFAHG  LIS+E YESLK +C G Y++V+P N  CL  ++ F K  SG+ + +IL+P C +                                   C +  + L+ YW N+ +VRKAL
Sbjct:  190 IVQEISNGNHLDSKPQINLQGFVLGNPATDTDIDLNSRIPFAHGKALISDEHYESLKRSCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKPDCMWL--------------------------------YSCMANLHSLSEYWANEKSVRKAL 314          
The following BLAST results are available for this feature:
BLAST of CX307850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SCP18_ARATH4.040e-3447.47Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP19_ARATH9.001e-3445.00Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP6_ARATH7.885e-3046.79Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP3_ARATH7.885e-3044.87Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP2_ARATH1.345e-2945.51Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP1_ARATH1.139e-2844.87Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP7_ARATH5.651e-2843.67Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP4_ARATH2.147e-2743.59Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP16_ARATH4.784e-2742.68Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP17_ARATH6.248e-2740.13Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC20002G01SK OF2 Citrus clementina cDNA clone C20002G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307850 ID=CX307850; Name=CX307850; organism=Citrus clementina; type=EST; length=476bp
ACTTGTTCAACGGATCTCAAATGAAAATGAAGAAGATATCAAACCGCTGA
TAAATCTCCAGGGATACATACTAGGGAACCCCAGAACAGACATGGTTGTT
GAACAAAACTCACAGATCCCATTTGCTCATGGAATGGGGCTTATTTCGAA
TGAACTCTATGAGTCACTGAAGATAACTTGTGGAGGAGAGTATGTAAACG
TAGATCCCAACAACAAAGATTGTTTGAATGATATTCAAACTTTCTCTAAG
TTGACTTCTGGAGTTGAAAAGTCGCATATATTGGAACCTCATTGTCAATT
TTTCTCTCCGAAGCCACGAGCGTCATCTCATAACAGAAGATCTCTCAATG
TCAATGAGCAATCTCAAGAATTCCTTAATCCTGAACCAACATTTCCTCCG
ATTGGCTGTCGATCTTATGGATATTTGCTCGCTCGCTATTGGGATAATGA
CCATAATGTCCGTAAGGCACTTCATA
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