CX307851

Overview
NameCX307851
Unique NameCX307851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 3.344e-59
Identity = 106/154 (68.83%), Postives = 119/154 (77.27%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+WG + YP+VPGHEIVG  TKVG NV+KFKEGD+VGVGV+  SCQ CESC Q LENYCP M  TYN+I  DGTK YGGYS+ IVVDQ +VLRFP+N+P D+GAPLLCAGITVYSPMKYYGMTE                AVKIGKAFGLKVT
Sbjct:   58 KNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVT 211          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 6.307e-58
Identity = 104/154 (67.53%), Postives = 120/154 (77.92%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+WG T YP+VPGHEI G VTKVG+NV+KFKEGD+VGVGV+V SCQ+CE CQQ LE+YCP  + TYNS    GT+T GGYSD +VV Q +VL+FPDN+PLDAGAPLLCAGITVYSPMKYYGMTEP               A+K GKAFGLKVT
Sbjct:   51 KNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVT 203          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 5.339e-57
Identity = 103/154 (66.88%), Postives = 117/154 (75.97%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N+WG T YP+VPGHEIVG VTKVG NV KF+ GD VGVGV+V SCQ CE+C Q LE YCP  + TYNS  + GT+TYGGYSD +VV Q YV++FPDN+PLDAGAPLLCAGITVYSPMKYYGMTEP               A+K GKAFGLKVT
Sbjct:   58 KNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYK-GTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVT 210          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.930e-55
Identity = 100/155 (64.52%), Postives = 115/155 (74.19%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMT-EPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N WG + YPI+PGHEIVG  TKVG NV+KFKEGD+VGVGV++ SCQ CESC Q LENYCP ++ TYNS   DGT+  GGYSD+IVVD  +VL  PD +P D+GAPLLCAGITVYSPMKYYGMT E                AVKIGKAFGL+VT
Sbjct:   52 KNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVT 206          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 7.216e-54
Identity = 100/156 (64.10%), Postives = 115/156 (73.72%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGT-KTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMT-EPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +N WG + YPI+PGHEIVG  TKVG NV+KFKEGD+VGVGV++ SCQ CESC Q LENYCP ++ TYNS   DGT +  GGYSD+IVVD  +VL  PD +P D+GAPLLCAGITVYSPMKYYGMT E                AVKIGKAFGL+VT
Sbjct:   52 KNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVT 207          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 7.979e-53
Identity = 93/154 (60.39%), Postives = 112/154 (72.73%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEW    YP+VPGHEI G VT+ G NV+KFK GDKVGVG +V SC  C+SC QGLEN+CP +I TYNS+D+DGT TYGGYS ++VV + +V+RFP+ MPLD GAPLLCAGITVYSPMKY+G+  P               AVK  KAFG+ VT
Sbjct:   51 KNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVT 204          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.505e-51
Identity = 93/154 (60.39%), Postives = 111/154 (72.08%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG   YP +PGHEIVG VT+VGN V  FK GDKVGVG +V SC+ CESC+  LENYCP MILTY S   DGT TYGGYSD++VV++H+ +R PDNM LDA APLLCAG+TVYSP+K++ + +P               AVK GKAFG KVT
Sbjct:   59 KNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVT 212          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 4.378e-51
Identity = 89/154 (57.79%), Postives = 112/154 (72.73%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEW  + YP+VPGHEI G VT+VG NV++FK GD+VGVG +V SC+ CESC  G EN+CP  + TYNS+D+DGT TYGGYS ++VV + +V+ FP+ MPLD GAPLLCAGITVY+PMKY+G+  P               AVK  +AFGLKVT
Sbjct:   61 KNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVT 214          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 7.468e-51
Identity = 92/154 (59.74%), Postives = 112/154 (72.73%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWGVT+YPIVPGHEIVG VT+VG+ V K K GDKVGVGVLV SC++C+ C   LENYC   ILTY +   DGT   GGYSD++V D+H+++R+P+N PLDAGAPLLCAGIT YSP+KY+G+ +P               AVK  KAFG KVT
Sbjct:   58 KNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVT 211          
BLAST of CX307851 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.173e-50
Identity = 87/154 (56.49%), Postives = 111/154 (72.08%), Query Frame = 1
Query:    1 RNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXAVKIGKAFGLKVT 462
            +NEWG + YP+VPGHEIVG VT+VG+ V KFK GD+VGVG +V SC+ CE+C   LENYCP  ILTY +   DG+ TYGGYSD++V D+H+++R PDN+PLD  APLLCAGIT YSP++Y+G+ +P               AVK  KA G+KVT
Sbjct:   56 KNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVT 209          
The following BLAST results are available for this feature:
BLAST of CX307851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
CADH9_ARATH3.344e-5968.83Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH1_STYHU6.307e-5867.53Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
MTDH_MEDSA5.339e-5766.88Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH3_ARATH2.930e-5564.52Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH7.216e-5464.10Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH5_ORYSJ7.979e-5360.39Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH_MESCR1.505e-5160.39Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH3_ORYSJ4.378e-5157.79Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
GEDH1_OCIBA7.468e-5159.74Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_FRAAN2.173e-5056.49Probable mannitol dehydrogenase OS=Fragaria ananas... [more]

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Properties
Property NameValue
Genbank descriptionC20002G02SK OF2 Citrus clementina cDNA clone C20002G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307851 ID=CX307851; Name=CX307851; organism=Citrus clementina; type=EST; length=464bp
AGAAATGAATGGGGTGTCACCAATTACCCAATTGTTCCCGGGCATGAAAT
TGTTGGTACTGTGACAAAAGTTGGAAATAACGTGTCAAAATTCAAAGAGG
GTGACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGTGAA
AGCTGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTACATA
TAACTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAGATC
TGATTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCTGACAACATGCCT
CTTGATGCGGGTGCACCACTTTTGTGTGCGGGGATCACAGTGTACAGCCC
AATGAAATATTATGGAATGACTGAGCCAGGCAAGCATTTGGGTGTAACAG
GACTTGGTGGGCTTGGCCATGTTGCTGTGAAAATTGGCAAGGCCTTTGGG
TTGAAAGTCACCGT
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