CX307853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307853 vs. ExPASy Swiss-Prot
Match: RH47A_ORYSJ (DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica GN=Os02g0636300 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.000e-56 Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 3 Query: 3 EAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATXXXXXXXXXXXXXXXXXXQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARST 509 E MHRI+EHVGR+SG + R+ LA R+ERQTI+VSAT+PFSVIRAARSWGHDP+LV+A +V+PLES+ D SLPP+L+HYYC +K QHKVDTLRRC+HAL+AQTVIAFMNNT+ LKD VFKLEARGMKA ELHGDLGKLARST Sbjct: 305 EDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLESITVPRPVLSQPDANSNSPSNSVNQAAVD-SLPPSLEHYYCTSKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARST 472
BLAST of CX307853 vs. ExPASy Swiss-Prot
Match: RH47B_ORYSJ (DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica GN=Os03g0219700 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 3.411e-56 Identity = 109/169 (64.50%), Postives = 130/169 (76.92%), Query Frame = 3 Query: 3 EAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATXXXXXXXXXXXXXXXXXXQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARST 509 E MHRI+EHVGR+SG + R+ LA R+ERQTI+VSAT+PFSVIRAARSWGHDP+LV+A +V+PL+S+ + A SLPP+L+HYYC++K QHKVDTLRRC+HAL+AQTVIAFMNNT+ LKD VFKLEARGMKA ELHGDLGKLARST Sbjct: 305 EDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLDSITVPRPVLSQTDANPNSPSNSVN-QAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARST 472
BLAST of CX307853 vs. ExPASy Swiss-Prot
Match: RH47_ARATH (DEAD-box ATP-dependent RNA helicase 47 OS=Arabidopsis thaliana GN=RH47 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52 Identity = 106/169 (62.72%), Postives = 127/169 (75.15%), Query Frame = 3 Query: 3 EAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATXXXXXXXXXXXXXXXXXXQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARST 509 E +HRI+EHVG+RSGA P K + RA RQTI+VSATVPFSVIRAA+SW H+P+LVQA V PL+++ + Q + QSLPPALKHYYC++K QHKVDTLRRCVHALDAQ+VIAFMN++RQLKD V+KLEARGM +AE+HGDLGKL RST Sbjct: 286 EDIHRILEHVGKRSGAGP---KGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAPVMSLTPTTSEADG---QIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRST 448 The following BLAST results are available for this feature:
BLAST of CX307853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX307853 ID=CX307853; Name=CX307853; organism=Citrus clementina; type=EST; length=513bpback to top |