CX307857

Overview
NameCX307857
Unique NameCX307857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length450
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307857 vs. ExPASy Swiss-Prot
Match: Y5848_ARATH (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.298e-16
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 1 
Query:   67 NGAAPEKAPATVASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETED 369
            NGA P +   T   FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D
Sbjct:   12 NGAGPVE---THLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKD 111
The following BLAST results are available for this feature:
BLAST of CX307857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5848_ARATH4.298e-1647.57Uncharacterized protein At5g48480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC20002G12SK OF2 Citrus clementina cDNA clone C20002G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307857 ID=CX307857; Name=CX307857; organism=Citrus clementina; type=EST; length=450bp
GTTTCTTTCCTTTGTCTCTAGACTCCAAAACTCTCTCGCTCAATGGCTGA
TGTCCAGGAGGTTCAGAATGGAGCTGCGCCGGAGAAGGCTCCTGCTACCG
TGGCCAGCTTCACGGGGATGAAGCCGCAGTTGCTTGTGGAAGCACCGAAG
GCTACTGACGCTGTTCAGTTCTACAAGACCGCGTTTGGTGCCGTGGAGAT
CGGCCGTAGCGTGGAAACCAAACGCAAGGCTGAACAGGAGCTCCCACTCA
TCTCCTGCGCTCAACTCGAGATTGCCGGCTCCACTTTCCTTGTCTCTGAC
GTTTCCGGTGACTCTGCTGCTGCACAGACCGTGGGGACCGGATGCGTGCT
TTGCTTGGAGACCGAGGACGTGGAGGCTGCCGTCGCCAAGGCTGTGAGTG
CTGGAGCTGTTGCTGAGGGTGAGCTCGCTGAAGGCAACGGCGCGTGTTGT
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